Bioconductor Txdb.mmusculus.ucsc.mm9.knowngene

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TxDb.Mmusculus.UCSC.mm9.knownGene ensembldb GenomicFeatures Mus_musculus

written 20 months ago by ramonmassoni ▴ 10

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annotatePeak chipseeker chipseq org.Mm.eg.db TxDb.Mmusculus.UCSC.mm9.knownGene

updated 10.0 years ago by Martin Morgan 25k • written 10.2 years ago by Elsa • 0

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software error txdb.mmusculus.ucsc.mm9.knowngene genomicfeatures

updated 10.7 years ago by Hervé Pagès 16k • written 10.7 years ago by nathan.harmston • 0

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Answer: How to model DE for RNA-seq in concordant monozygotic twins? by Gordon Smyth 53k

Your question is more about science than it is about software syntax, and I can't give advice about how to conduct a scientific analysis, n…

Comment: incomplete imputation of missing values with LEA impute() function by Gordon Smyth 53k

Nadia, please tag your question with the name of the package ("LEA") that you are asking about. "impute" is the name of a different Biocond…

Comment: Sharing a collection of datasets in ExperimentHub by Aaron Lun ★ 29k

FYI the **scRNAseq** packages uses a non-ExperimentHub storage platform, see [here](https://github.com/ArtifactDB/gypsum-worker) for more d…

Comment: Error Loading Experiment from SimBenchData Package by ATpoint ★ 4.9k

Is the Seurat package installed? The error somewhat suggests that it could be related, and at https://www.bioconductor.org/packages/release…

Answer: Help with defining groups by Gordon Smyth 53k

Defining sample groups is separate to reading in the DIA-NN data, because the sample conditions and covariates are not necessarily coded in…

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Comment: readDNAStringSet with non DNA characters

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