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variancepartition
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significant difference of p-values with dream() after updating VariancePartition
variancePartition
5 weeks ago • updated 4 weeks ago
Le
• 0
1
vote
4
replies
697
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BiocParallel serialization errors on Windows
variancePartition
BiocParallel
5 months ago
hayleyw
• 0
1
vote
7
replies
889
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DuplicateCorrelation() block by duplicate sample or by cell line ?
variancePartition
RNASeqData
limma
BulkRNAseq
RNASeq
updated 5 months ago by
Gordon Smyth
50k • written 7 months ago by
Gimena
• 0
0
votes
9
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879
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How long does it usually take to complete dream() from start to finish?
variancePartition
mixedmodel
dream
9 months ago
hayleyw
• 0
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Comment: Not able to install any Bioconductor 3.18 package [unable to access index]
by
mgdrnl
• 0
I solved the problem installing the latest R version (4.4.0)
Answer: Get gene symbols for a set of hg19 coordinates
by
ATpoint
★ 4.1k
Simply download a GTF file (for example from GENCODE) matching the current genome and/or annotation version you are using in your project a…
Comment: Not able to install any Bioconductor 3.18 package [unable to access index]
by
ATpoint
★ 4.1k
Try the mirror suggestion for now: https://support.bioconductor.org/p/9153734/#9153755
Comment: unable to access bioconductor packages - qvalue installation failed...
by
ATpoint
★ 4.1k
Seems to be a general problem at the moment, can reproduce. The the mirror suggestion here: https://support.bioconductor.org/p/9153734/#915…
Comment: Running ENmix with mouse methylation manifest: readidat error - Error in readman
by
Karosham.Reddy
• 0
Thank you for the suggestion the ENmix version is using is ENmix_1.38.01. I tried your suggested code, R identified the idat files but sti…
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Comment: recount3 problem downloading data from source sra
Not able to install any Bioconductor 3.18 package [unable to access index]
unable to access bioconductor packages - qvalue installation failed...
Not able to install any Bioconductor 3.18 package [unable to access index]
can't open mghp.osn.xsede.org
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