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wgcna
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query regarding how to apply WGCNA on replicates
replicatesRNAseq
WGCNA
4 hours ago
k200987
• 0
0
votes
2
replies
937
views
using WGCNA, positive or negative corrlation between genes composing modules.
correlation
wgcna
network
updated 16 hours ago by
mariakenneth147
• 0 • written 17 months ago by
pharamac
• 0
11
votes
5
replies
7.4k
views
Theoretical WGCNA Question
WGCNA
Theory
Scale-Free Topology
updated 27 days ago by
Garrett
• 0 • written 9.1 years ago by
brohawndg
▴ 150
2
votes
5
replies
1.2k
views
DESeq2 remove batch effect
BatchEffect
RNASeqData
WGCNA
DESeq2
updated 28 days ago by
Ashley
• 0 • written 11 months ago by
zxc741xb
• 0
0
votes
5
replies
1.7k
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blockwiseModule crashes in the end and doesn't generate modules
WGCNA
written 13 months ago by
mauricio.microbiol
• 0
5 results • Page
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Comment: Can DESeq2 rlog normalized matrix reflects time course result directly?
by
pangtaihin
• 0
Thank you:)
Comment: Can DESeq2 rlog normalized matrix reflects time course result directly?
by
pangtaihin
• 0
Thank you! But I apologize for cannot fully grasp your point. Do you mean that when the counts are high, rlogged matrix can represent the t…
Comment: Query regarding phyloseq object construct with QIIME output
by
Rosso
• 0
Constructing a phyloseq object from QIIME output involves several steps to integrate taxonomic abundance data, sample metadata, and phyloge…
Answer: Error while installing BiocManager::install("org.Vdahliae.eg.db")
by
Marcel Ramos
690
`BiocManager` does not install local packages. It only installs Bioconductor, CRAN, and GitHub ones. You should install local packages w…
Comment: error running enricher from clusterprofiler
by
Yael
• 0
It worked!!! Thanks alot, i think something in the gene_list wasnt right... Thanks agian
Votes
Answer: Can DESeq2 rlog normalized matrix reflects time course result directly?
Comment: Can DESeq2 rlog normalized matrix reflects time course result directly?
Comment: Error while installing BiocManager::install("org.Vdahliae.eg.db")
Answer: Trim/Filter out-of-bounds GRanges
Comment: How to correctly adjust for gender in edgeR
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