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correlation
•
reset
1
vote
2
replies
720
views
QSEA- Extraction of Normalized methylation across the samples
qsea
ngsReports
correlation
written 21 months ago by
Researcher
▴ 10
0
votes
1
reply
1.5k
views
Human genes correlation to Bacterial genes
correlation
pearsoncorrelation
rna-seq
differential gene expression
updated 2.2 years ago by
ATpoint
★ 5.0k • written 7.8 years ago by
saad_k6
• 0
0
votes
2
replies
2.9k
views
using WGCNA, positive or negative corrlation between genes composing modules.
correlation
wgcna
network
updated 21 months ago by
mariakenneth147
• 0 • written 3.2 years ago by
pharamac
• 0
0
votes
1
reply
1.7k
views
WGCNA correlation sign differences between eigen genes/ hub genes and clinical traits
hub
correlation
eigen
WGCNA
updated 2.2 years ago by
Vanatta
• 0 • written 4.2 years ago by
mairah.khan
• 0
0
votes
1
reply
1.6k
views
Correlation between two different datasets: between results of RNAseq and absence/presence of Type3 Secretion System
RNASeq
Correlation
DESeq2
updated 3.5 years ago by
Michael Love
43k • written 3.5 years ago by
keshav.prasad.gubbi
• 0
1
vote
1
reply
1.7k
views
spearman correlation
correlation
sperarman
updated 4.4 years ago by
ATpoint
★ 5.0k • written 4.4 years ago by
info@shi
• 0
15
votes
17
replies
32k
views
WGCNA: What is `soft thresholding`?
wgcna
network analysis
network
correlation
coexpression
updated 5.2 years ago by
Lluís Revilla Sancho
▴ 760 • written 9.4 years ago by
jol.espinoz
▴ 40
5
votes
1
reply
2.8k
views
Best practice for correlating scRNA seq to bulkRNA seq data
seurat
edgeR
spearman
correlation
scRNAseq
updated 5.8 years ago by
Aaron Lun
★ 29k • written 5.8 years ago by
tobias-messmer
▴ 20
0
votes
2
replies
1.5k
views
Correlation plot how to improve?
plot
correlation
6.3 years ago
annkolman78
• 0
4
votes
7
replies
2.0k
views
Are spurious correlations possible in correlating two DESeq2 foldchanges computed using the same reference sample group?
deseq2
correlation
7.2 years ago
Cornwell, Adam
▴ 110
0
votes
3
replies
1.8k
views
Coverage profile comparison
Targeted sequencing
correlation
coverage
euclid
clustering
7.3 years ago
faramer86
• 0
0
votes
1
reply
1.5k
views
How can I do a correlation heatmap between two groups of matrices (metabolomic and transcriptomic data)
correlation
7.6 years ago
adriana.gallego.02
▴ 20
0
votes
1
reply
1.7k
views
Differential Coexpression Analysis
differential analysis
differential gene expression
coexpression
correlation
updated 7.9 years ago by
Peter Langfelder
★ 3.0k • written 7.9 years ago by
hkarakurt
▴ 20
2
votes
1
reply
1.2k
views
Is there any prerequisites for taking correlation in genomic data?
correlation
updated 8.0 years ago by
chris86
▴ 420 • written 8.0 years ago by
Arman Shahrisa
▴ 20
0
votes
6
replies
2.3k
views
expression correlation on an ExpressionSet
ExpressionSet
caseControl
Correlation
Plot
updated 8.7 years ago by
vulegom
• 0 • written 9.0 years ago by
DataFanatic
▴ 10
1
vote
2
replies
2.7k
views
Diffbind: how to include all the samples in the heatmap while using the contrast
diffbind
heatmap
correlation
updated 8.9 years ago by
Rory Stark
★ 5.3k • written 8.9 years ago by
a.bahraini88
• 0
7
votes
3
replies
4.5k
views
plotting correlation between samples
correlation
updated 8.9 years ago by
Aaron Lun
★ 29k • written 8.9 years ago by
teresati
▴ 10
4
votes
9
replies
4.5k
views
WGCNA | pickSoftThreshold.fromSimilarity not working for input similarity matrix
WGCNA
similarity
correlation
bioconductor
rnaseq
updated 9.0 years ago by
Peter Langfelder
★ 3.0k • written 9.0 years ago by
jol.espinoz
▴ 40
4
votes
4
replies
2.0k
views
Correlation analysis taking into account multiple correlations
edger
rna-seq
correlation
updated 9.4 years ago by
Andrew_McDavid
▴ 280 • written 9.4 years ago by
jhj89
▴ 10
2
votes
7
replies
5.9k
views
How to create "trait data" file for WGCNA
wgcna
coexpression
correlation
microarray
updated 10.0 years ago by
Peter Langfelder
★ 3.0k • written 10.0 years ago by
shalinisonar13
▴ 20
2
votes
4
replies
3.0k
views
Can DESeq correlate genes expression patterns with a numerical sample factor?
deseq2
correlation
deseq
linear
updated 10.5 years ago by
Ryan C. Thompson
★ 7.9k • written 10.5 years ago by
matt.arno
• 0
3
votes
3
replies
1.9k
views
Correlation/clustering of numeric (continuous) and categorical values
correlation
updated 10.8 years ago by
Sean Davis
21k • written 10.8 years ago by
Johannes Rainer
★ 2.1k
22 results • Page
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Votes
Answer: DiffBind differential analysis
Answer: Limma-voom sample weights and impact on DEG numbers
C: Why limma, edgeR, and DESeq did not implement fold change moderation first?
Comment: using limma trend workflow in CAMERA
C: z-score with DESeq2?
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