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Comment: C: DESEq2: the use of interaction term and grouping with different betaPrior argume
5.9 years ago tarun2 • 0
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3
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DESEq2: the use of interaction term and grouping with different betaPrior arguments in older version of DESEq2
deseq2 interaction term multiple groups betaprior
updated 6.0 years ago by 41k • written 6.0 years ago by • 0
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0
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3.8k
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Comment: C: DESeq2: betaPrior changes significance dramatically
6.0 years ago tarun2 • 0
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1
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3.8k
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Comment: C: DESeq2: betaPrior changes significance dramatically
6.0 years ago tarun2 • 0
0
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0
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846
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Principle in selecting the "appropriate" merging value for module generation
wgcna module mergecutheight coexpression
6.0 years ago tarun2 • 0
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0
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1.9k
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Comment: C: DESeq LRT test and construction of Co-expression network
6.0 years ago tarun2 • 0
0
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2
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3.6k
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Cannot open URL 'http://rest.kegg.jp/get/osaNA/kgml': HTTP status was '400 Bad Request'
gage gage package pathview rna-seq
updated 2.1 years ago by • 0 • written 6.2 years ago by • 0
0
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0
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1.4k
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Comment: C: design versus interaction term similarities and/or differences?
6.2 years ago tarun2 • 0
0
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1
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1.4k
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Comment: C: design versus interaction term similarities and/or differences?
6.2 years ago tarun2 • 0
0
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1
reply
1.4k
views
Comment: C: design versus interaction term similarities and/or differences?
6.2 years ago tarun2 • 0
0
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1
reply
1.4k
views
Comment: C: design versus interaction term similarities and/or differences?
6.2 years ago tarun2 • 0
1
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8
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1.4k
views
design versus interaction term similarities and/or differences?
deseq2 ANOVA design interaction term
updated 6.2 years ago by 41k • written 6.2 years ago by • 0
0
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1
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11k
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Comment: C: Is there a conceptual difference between vst/rlog transforms and lfcShrink?
6.2 years ago tarun2 • 0
0
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1
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11k
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Comment: C: Is there a conceptual difference between vst/rlog transforms and lfcShrink?
6.2 years ago tarun2 • 0
0
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1
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11k
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Comment: C: Is there a conceptual difference between vst/rlog transforms and lfcShrink?
6.2 years ago tarun2 • 0
0
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1
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11k
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Comment: C: Is there a conceptual difference between vst/rlog transforms and lfcShrink?
updated 6.3 years ago by 41k • written 6.3 years ago by • 0
1
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1
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1.5k
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sample removal after clustering
deseq2 rlog transformation
updated 6.3 years ago by 41k • written 6.3 years ago by • 0
2
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5
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1.5k
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DEGs generation parameters and specificities
deseq2 results design and contrast matrix
updated 6.4 years ago by 41k • written 7.0 years ago by • 0
0
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1
reply
1.1k
views
What R version does systemPipeR runs
systempiper R batchjobs
updated 6.6 years ago by ★ 1.7k • written 6.6 years ago by • 0
0
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1
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1.8k
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Comment: C: Unused argument of reader = read_tsv on R version 3.4.1
6.7 years ago tarun2 • 0
0
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1
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1.8k
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Comment: C: Unused argument of reader = read_tsv on R version 3.4.1
6.7 years ago tarun2 • 0
0
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1
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1.8k
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Comment: A: Unused argument of reader = read_tsv on R version 3.4.1
6.7 years ago tarun2 • 0
2
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9
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1.8k
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Unused argument of reader = read_tsv on R version 3.4.1
tximport
6.7 years ago tarun2 • 0
1
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2
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1.5k
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DESeq2 version 1.16.1 installation and difference with version 1.14.1
deseq2 betaprior=true lfcshrink
updated 6.7 years ago by 65k • written 6.7 years ago by • 0
1
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1
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1.1k
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DESeq2 function in interpreting the differential expression results in terms of higher order biological processes or molecular pathways
pathway analysis deseq2
updated 7.0 years ago by 41k • written 7.0 years ago by • 0
0
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1
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1.5k
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Comment: C: DEGs generation parameters and specificities
7.0 years ago tarun2 • 0
0
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1
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1.5k
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Comment: C: DEGs generation parameters and specificities
7.0 years ago tarun2 • 0
0
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1
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3.8k
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Comment: C: Transcript level differential expression analysis
7.0 years ago tarun2 • 0
0
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1
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3.8k
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Comment: C: Transcript level differential expression analysis
7.0 years ago tarun2 • 0
3
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7
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3.8k
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Transcript level differential expression analysis
deseq2 deseqdataset transcripts
updated 7.0 years ago by 41k • written 7.0 years ago by • 0
0
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1
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1.8k
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Different padj value after multiple testing
deseq2 padj multiple comparisons differential gene expression
updated 7.0 years ago by 41k • written 7.0 years ago by • 0
0
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0
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1.3k
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Comment: C: input data from CLC bio edge tests result
7.4 years ago tarun2 • 0
0
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1
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1.3k
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Comment: C: input data from CLC bio edge tests result
7.4 years ago tarun2 • 0
1
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4
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1.3k
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input data from CLC bio edge tests result
deseq2
updated 7.4 years ago by 41k • written 7.4 years ago by • 0
0
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1
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16k
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Comment: C: 3D PCA Plot of RNA-seq Data using plotPCA from within DESeq2
7.4 years ago tarun2 • 0
35 results • Page 1 of 1
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