Bioconductor Gage package

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891

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gage package gage

5.8 years ago melkile26 • 0

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1.1k

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gage gage package gene expression matrix gene set analysis

5.8 years ago atakanekiz ▴ 30

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2.7k

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gage package error

updated 5.9 years ago by James W. MacDonald 65k • written 5.9 years ago by Miskey, Csaba ▴ 20

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3.6k

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gage gage package pathview rna-seq

updated 2.1 years ago by Helen • 0 • written 6.2 years ago by tarun2 • 0

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1.7k

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kegg geneset genelist gage package

updated 6.7 years ago by Gordon Smyth 50k • written 6.7 years ago by sup230 ▴ 30

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1.4k

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gage package deseq2

6.7 years ago sup230 ▴ 30

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1.6k

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gage gage package

updated 7.5 years ago by Luo Weijun ★ 1.6k • written 7.5 years ago by Michael • 0

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1.4k

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R gage package rnaseq pathview

7.7 years ago joanito.liberti • 0

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931

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gage package path.ids RNA-Seq

7.7 years ago rl1385 • 0

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906

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t-test GAGE package Kolmogorov-Smirnov test Gene-Set enrichment

7.8 years ago smt8n • 0

10 results • Page 1 of 1

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Comment: Math expression in shapeCustom legend in EnhancedVolcano by James W. MacDonald 65k

So basically you are using HTML markup to set your subscripts and whatnot, and then `element_markdown` does the rest.

Comment: Math expression in shapeCustom legend in EnhancedVolcano by James W. MacDonald 65k

Oh snap. Foiled again. Here it is with spaces & ge ; and & lt ;

Comment: Math expression in shapeCustom legend in EnhancedVolcano by James W. MacDonald 65k

Oh LOL. My markdown got edited by the markdown editor! What is between the p and 50 in the first case is the HTML for greater than or equal…

Comment: Math expression in shapeCustom legend in EnhancedVolcano by James W. MacDonald 65k

Ah, good point. You could instead try ``` > library(ggtext) > keyvals.shape = c(rep(3,10), rep(2,8)) > names(keyvals.shape) = ifelse(keyva…

Comment: Math expression in shapeCustom legend in EnhancedVolcano by pl23 • 0

Hi, Yes, I've tried this, but I am not sure if it is possible to assign `bquote` values to the names of a vector. In particular, if I use…

Votes

Comment: Opposite sign of LFC in count plots of DEGs (DESeq2)

biomaRt error: database disk image is malformed

Comment: biomaRt : No lock file for BiocFileCache

Answer: Cross-species analysis - how to compute the mid parent value?

Answer: Batch/method effect correction on a cohort of patients with RUVseq and DESeq2

Awards • All

Scholar to James W. MacDonald 65k

Supporter to JKim • 0