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1
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4.2k
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Comment: Comment: Data input for aracne2regulon function in viper package
3.5 years ago Keith Hughitt ▴ 180
1
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1
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4.2k
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Comment: C: Data input for aracne2regulon function in viper package
4.9 years ago Keith Hughitt ▴ 180
0
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0
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3.8k
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Comment: C: lpsymphony compilation trouble
5.1 years ago Keith Hughitt ▴ 180
0
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1
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1.6k
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Comment: C: DESeq2 2x2 factorial design: find genes unique to factor A?
5.1 years ago Keith Hughitt ▴ 180
2
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3
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1.6k
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DESeq2 2x2 factorial design: find genes unique to factor A?
deseq2 deseq differential expression contrasts
updated 5.1 years ago by 43k • written 5.1 years ago by ▴ 180
1
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1
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1.3k
views
Best practices for sharing RMarkdown-based supplemental PDFs?
rmarkdown knitr
updated 5.9 years ago by ★ 28k • written 5.9 years ago by ▴ 180
0
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1
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7.7k
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Comment: C: rowSums() rowMeans() don't work on sparse matrix "dgCMatrix"
6.5 years ago Keith Hughitt ▴ 180
0
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0
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2.3k
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Comment: C: Unexpected format to the list of available marts error (12/11/2017)
7.0 years ago Keith Hughitt ▴ 180
4
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0
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7.1k
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Answer: A: Finding orthologous human/mouse ENSEMBL IDs
7.5 years ago Keith Hughitt ▴ 180
6
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1
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7.1k
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Finding orthologous human/mouse ENSEMBL IDs
human mouse ensembl annotationdbi homologue
7.5 years ago Keith Hughitt ▴ 180
0
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0
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2.1k
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Comment: C: rtracklayer import.gff3 function no longer working in R 3.4
7.7 years ago Keith Hughitt ▴ 180
0
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0
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2.1k
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Comment: C: rtracklayer import.gff3 function no longer working in R 3.4
7.7 years ago Keith Hughitt ▴ 180
3
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4
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2.1k
views
rtracklayer import.gff3 function no longer working in R 3.4
rtracklayer import.gff3 gff
updated 7.7 years ago by 25k • written 7.7 years ago by ▴ 180
0
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0
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1.4k
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Using readAAMultipleAlignment to parse CMFinder Stockholm format alignments
biostrings stockholm msa cmfinder
7.9 years ago Keith Hughitt ▴ 180
2
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3
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2.4k
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ArrayExpress unable to find raw data: "Experiment has no raw files available"
arrayexpress
updated 8.1 years ago by ▴ 20 • written 8.1 years ago by ▴ 180
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0
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2.4k
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Comment: C: ArrayExpress unable to find raw data: "Experiment has no raw files available"
8.1 years ago Keith Hughitt ▴ 180
0
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0
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1.8k
views
Comment: C: Why the package readr can't be find?
8.3 years ago Keith Hughitt ▴ 180
0
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1
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1.9k
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Comment: C: AnnotationHub and ExperimentHub make "~" directory in my home
8.3 years ago Keith Hughitt ▴ 180
0
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0
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1.9k
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Comment: C: AnnotationHub and ExperimentHub make "~" directory in my home
8.3 years ago Keith Hughitt ▴ 180
0
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0
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1.9k
views
Comment: C: AnnotationHub and ExperimentHub make "~" directory in my home
8.3 years ago Keith Hughitt ▴ 180
0
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0
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1.9k
views
Comment: C: Issue with GenomicRanges in windows 3.3.1
8.3 years ago Keith Hughitt ▴ 180
0
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1
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1.6k
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Comment: C: CopywriteR error: "Error in .Method"
8.4 years ago Keith Hughitt ▴ 180
0
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0
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1.4k
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Comment: C: How can I get global Fisher score for overlap of 3 GRanges object by element-wis
8.4 years ago Keith Hughitt ▴ 180
1
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1
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2.3k
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Answer: A: PCA of bladderdata ("Batch effects and confounders" tutorial)
8.4 years ago Keith Hughitt ▴ 180
0
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0
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2.6k
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Comment: C: Error in for 'x' has a zero dimension WGCNA
8.5 years ago Keith Hughitt ▴ 180
0
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0
replies
4.5k
views
Comment: C: org.Hs.eg.db - hg38 build?
8.5 years ago Keith Hughitt ▴ 180
0
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1
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4.5k
views
Answer: A: org.Hs.eg.db - hg38 build?
8.5 years ago Keith Hughitt ▴ 180
0
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0
replies
1.2k
views
Comment: C: Runing into error while trying GRanges from R
8.5 years ago Keith Hughitt ▴ 180
0
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0
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1.5k
views
Comment: C: Anyone know how to make a plot like this - I don't even know what it's called.
8.5 years ago Keith Hughitt ▴ 180
0
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0
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2.0k
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Comment: C: biomaRt crashes when result contains missing values
8.5 years ago Keith Hughitt ▴ 180
0
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1
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7.9k
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Answer: A: WGCNA HELP - Error: REAL() can only be applied to a 'numeric', not a 'integer'
8.9 years ago Keith Hughitt ▴ 180
0
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0
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2.3k
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Comment: C: Error running makeTxDbFromGFF
9.1 years ago Keith Hughitt ▴ 180
0
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1
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2.3k
views
Answer: A: Error running makeTxDbFromGFF
9.1 years ago Keith Hughitt ▴ 180
1
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0
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1.6k
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Comment: C: biomaRt error when creating a mart object
9.1 years ago Keith Hughitt ▴ 180
0
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1
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1.2k
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Feature Request: improve output when printing GenomicRanges instances
GenomicRanges featurerequest
9.3 years ago Keith Hughitt ▴ 180
0
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1
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3.4k
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Comment: C: About GOSeq GO and KEGG enrichment analysis
9.4 years ago Keith Hughitt ▴ 180
0
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0
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11k
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Answer: A: Use of various distance measures and clustering methods in heatmap creation
9.4 years ago Keith Hughitt ▴ 180
0
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2
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1.4k
views
makeOrgPackage: possible to add option to allow GO terms now in GO.db?
annotationforge makeorgpackage go
9.5 years ago Keith Hughitt ▴ 180
0
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0
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1.4k
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Answer: A: makeOrgPackage: possible to add option to allow GO terms now in GO.db?
9.5 years ago Keith Hughitt ▴ 180
0
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0
replies
1.4k
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Answer: A: makeOrgPackage: possible to add option to allow GO terms now in GO.db?
9.5 years ago Keith Hughitt ▴ 180
0
votes
3
replies
1.5k
views
RefNet: source/data preparation used for Gerstein et al (2012) human TF data?
refnet annotationhub
updated 9.5 years ago by ▴ 100 • written 9.6 years ago by ▴ 180
0
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0
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1.5k
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Comment: C: RefNet: source/data preparation used for Gerstein et al (2012) human TF data?
9.6 years ago Keith Hughitt ▴ 180
0
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1
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2.6k
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Comment: C: AnnotationHub has no (not all) data
9.6 years ago Keith Hughitt ▴ 180
1
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1
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3.1k
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Answer: A: Setting package name in makeTxDbPackage
9.6 years ago Keith Hughitt ▴ 180
0
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0
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3.1k
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Comment: C: Setting package name in makeTxDbPackage
9.6 years ago Keith Hughitt ▴ 180
2
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1
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3.1k
views
Answer: A: Setting package name in makeTxDbPackage
9.6 years ago Keith Hughitt ▴ 180
0
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0
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3.1k
views
Comment: C: Setting package name in makeTxDbPackage
9.6 years ago Keith Hughitt ▴ 180
3
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10
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4.9k
views
Getting a list of all tRNA encoding genes for an organism?
trna ncrna genomicfeatures featuredb biomart
updated 9.7 years ago by 16k • written 9.7 years ago by ▴ 180
0
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1
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4.9k
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Comment: C: Getting a list of all tRNA encoding genes for an organism?
9.7 years ago Keith Hughitt ▴ 180
0
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1
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4.9k
views
Comment: C: Getting a list of all tRNA encoding genes for an organism?
9.7 years ago Keith Hughitt ▴ 180
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