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DESeq2 result really different when only use some sample vs all sample
deseq2 rnaseq
updated 16 months ago by • 0 • written 7.4 years ago by ▴ 60
0
votes
1
reply
499
views
Adding samples data from different experiment
rna-seq deseq2
updated 6.0 years ago by 43k • written 6.0 years ago by ▴ 60
0
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0
replies
2.0k
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Comment: C: Inconsistent result between limma/voom and DESeq2
6.3 years ago bharata1803 ▴ 60
0
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1
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2.0k
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Comment: C: Inconsistent result between limma/voom and DESeq2
6.3 years ago bharata1803 ▴ 60
2
votes
4
replies
2.0k
views
Inconsistent result between limma/voom and DESeq2
deseq2 limma voom limma-voom rnaseq
updated 6.3 years ago by 52k • written 6.3 years ago by ▴ 60
0
votes
0
replies
1.2k
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CAGEr get TSS in bed file
TSS promoter cage cager
6.3 years ago bharata1803 ▴ 60
0
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1
reply
2.2k
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Comment: C: DESeq2 with several biological replicates
6.4 years ago bharata1803 ▴ 60
0
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1
reply
2.2k
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Comment: C: DESeq2 with several biological replicates
6.4 years ago bharata1803 ▴ 60
0
votes
7
replies
2.2k
views
DESeq2 with several biological replicates
rnaseq deseq2 differential gene expression
6.4 years ago bharata1803 ▴ 60
0
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1
reply
2.2k
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Comment: C: DESeq2 with several biological replicates
6.4 years ago bharata1803 ▴ 60
2
votes
0
replies
2.7k
views
WGCNA package : identification of hub genes
wgcna
7.2 years ago bharata1803 ▴ 60
0
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1
reply
3.0k
views
Comment: C: DESeq2 result really different when only use some sample vs all sample
7.4 years ago bharata1803 ▴ 60
0
votes
0
replies
3.0k
views
Comment: C: DESeq2 result really different when only use some sample vs all sample
7.4 years ago bharata1803 ▴ 60
0
votes
1
reply
3.0k
views
Comment: C: DESeq2 result really different when only use some sample vs all sample
7.4 years ago bharata1803 ▴ 60
0
votes
1
reply
3.0k
views
Comment: C: DESeq2 result really different when only use some sample vs all sample
7.4 years ago bharata1803 ▴ 60
0
votes
1
reply
2.4k
views
Comment: C: DEseq2: any problem with unbalanced number of sample in normal/tumor study?
7.4 years ago bharata1803 ▴ 60
0
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4
replies
2.4k
views
DEseq2: any problem with unbalanced number of sample in normal/tumor study?
deseq2 rnaseq tcga
updated 7.4 years ago by 43k • written 7.4 years ago by ▴ 60
2
votes
1
reply
1.4k
views
DESeq2 for read count input from 2 different NGS platforms
rnaseq deseq2
updated 8.1 years ago by ★ 7.9k • written 8.1 years ago by ▴ 60
2
votes
1
reply
2.2k
views
Answer: A: Deseq2 results interpretation
8.8 years ago bharata1803 ▴ 60
0
votes
0
replies
1.6k
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Comment: C: Generate sample data based on DESeq2 result
9.1 years ago bharata1803 ▴ 60
0
votes
1
reply
1.6k
views
Comment: C: Generate sample data based on DESeq2 result
9.1 years ago bharata1803 ▴ 60
1
vote
4
replies
1.6k
views
Generate sample data based on DESeq2 result
deseq2
updated 9.1 years ago by 43k • written 9.1 years ago by ▴ 60
7
votes
6
replies
7.7k
views
DESeq2 rlog function takes too long
deseq2
updated 9.2 years ago by ▴ 20 • written 9.2 years ago by ▴ 60
0
votes
0
replies
7.7k
views
Comment: C: DESeq2 rlog function takes too long
9.2 years ago bharata1803 ▴ 60
0
votes
0
replies
7.7k
views
Comment: C: DESeq2 rlog function takes too long
9.2 years ago bharata1803 ▴ 60
2
votes
1
reply
3.7k
views
DESeq2 with multiple conditions
deseq2 rnaseq
updated 9.2 years ago by 43k • written 9.2 years ago by ▴ 60
0
votes
0
replies
1.3k
views
Comment: C: Further analysis of gene expression data
9.2 years ago bharata1803 ▴ 60
0
votes
2
replies
1.3k
views
Further analysis of gene expression data
limma voom rnaseq
updated 9.2 years ago by ★ 28k • written 9.2 years ago by ▴ 60
0
votes
1
reply
1.3k
views
Comment: C: Big p-value/adj p-value with quite good read count
9.3 years ago bharata1803 ▴ 60
2
votes
4
replies
1.3k
views
Big p-value/adj p-value with quite good read count
rnaseq voom limma
updated 9.3 years ago by ★ 28k • written 9.3 years ago by ▴ 60
0
votes
0
replies
4.4k
views
Comment: C: Limma log transform RNA-seq and microarray
9.3 years ago bharata1803 ▴ 60
0
votes
0
replies
4.4k
views
Comment: C: Limma log transform RNA-seq and microarray
9.3 years ago bharata1803 ▴ 60
2
votes
4
replies
4.4k
views
Limma log transform RNA-seq and microarray
limma
updated 9.3 years ago by ★ 28k • written 9.3 years ago by ▴ 60
0
votes
0
replies
1.2k
views
Comment: C: Non-DGE genes from Limma
9.3 years ago bharata1803 ▴ 60
3
votes
2
replies
1.2k
views
Non-DGE genes from Limma
limma rnaseq microarray
updated 9.3 years ago by 52k • written 9.3 years ago by ▴ 60
0
votes
0
replies
1.3k
views
Comment: C: Basic question about Limma make contrast
9.4 years ago bharata1803 ▴ 60
2
votes
2
replies
1.3k
views
Basic question about Limma make contrast
limma
updated 9.4 years ago by 52k • written 9.4 years ago by ▴ 60
0
votes
0
replies
4.1k
views
Comment: C: Limma get all DE genes or filter by logFC
9.4 years ago bharata1803 ▴ 60
3
votes
2
replies
4.1k
views
Limma get all DE genes or filter by logFC
limma microarray rnaseq
updated 9.4 years ago by ★ 28k • written 9.4 years ago by ▴ 60
0
votes
0
replies
2.6k
views
Comment: C: ExpressionSet expression values is negative from NCBI GSE data set
9.4 years ago bharata1803 ▴ 60
1
vote
1
reply
1.1k
views
Limma ebayes function error without any messages
limma ebayes
updated 9.4 years ago by ★ 28k • written 9.4 years ago by ▴ 60
0
votes
1
reply
2.6k
views
Comment: C: ExpressionSet expression values is negative from NCBI GSE data set
9.4 years ago bharata1803 ▴ 60
0
votes
7
replies
2.6k
views
ExpressionSet expression values is negative from NCBI GSE data set
microarray differential gene expression
updated 9.4 years ago by 52k • written 9.4 years ago by ▴ 60
0
votes
0
replies
9.4k
views
Comment: C: DESeq2 Error NA values
9.8 years ago bharata1803 ▴ 60
0
votes
17
replies
9.4k
views
DESeq2 Error NA values
deseq2
updated 9.8 years ago by 43k • written 9.8 years ago by ▴ 60
0
votes
1
reply
9.4k
views
Comment: C: DESeq2 Error NA values
9.8 years ago bharata1803 ▴ 60
0
votes
1
reply
9.4k
views
Comment: C: DESeq2 Error NA values
9.8 years ago bharata1803 ▴ 60
0
votes
1
reply
9.4k
views
Comment: C: DESeq2 Error NA values
9.8 years ago bharata1803 ▴ 60
0
votes
1
reply
9.4k
views
Comment: C: DESeq2 Error NA values
9.8 years ago bharata1803 ▴ 60
0
votes
1
reply
9.4k
views
Comment: C: DESeq2 Error NA values
9.8 years ago bharata1803 ▴ 60
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