Bioconductor Ebayes

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topTable MicroarrayData ebayes limma Microarray

2.8 years ago snijesh ▴ 20

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1.0k

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limma eBayes decideTests topTable

updated 3.8 years ago by Gordon Smyth 48k • written 3.8 years ago by irene.roman • 0

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limma eBayes

updated 4.8 years ago by Gordon Smyth 48k • written 4.8 years ago by Sebastian Hesse ▴ 70

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Limma ebayes bayesian ls

updated 5.2 years ago by Gordon Smyth 48k • written 5.2 years ago by CantExitVIM ▴ 10

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1.4k

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model.matrix lmFit eBayes GEOquery limma

5.8 years ago darthratus • 0

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ebayes limma bioconductor

updated 6.1 years ago by Gordon Smyth 48k • written 6.1 years ago by reventropy2003 ▴ 10

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ebayes limma

6.1 years ago peirinl • 0

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1.5k

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eBayes limma error

updated 6.4 years ago by James W. MacDonald 64k • written 6.4 years ago by calen.p.ryan • 0

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ebayes limma voom

6.8 years ago bag59 • 0

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1.8k

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limma ebayes

updated 7 months ago by Gordon Smyth 48k • written 6.9 years ago by cemcdono • 0

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845

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limma ebayes

updated 8.1 years ago by Aaron Lun ★ 28k • written 8.1 years ago by bharata1803 ▴ 60

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limma ebayes statistical inference

updated 8.3 years ago by Gordon Smyth 48k • written 8.3 years ago by ssrajan86 • 0

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limma eset error ebayes

updated 8.4 years ago by James W. MacDonald 64k • written 8.4 years ago by Vani ▴ 20

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ebayes expression affymetrix pd.hugene.2.0.st limma

updated 8.9 years ago by Gordon Smyth 48k • written 8.9 years ago by Paulo Nuin ▴ 200

14 results • Page 1 of 1

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Comment: DESeq2 - groups with biological replicates from the same patient by Oscar • 0

Thanks James for your helpful response. This particular experimental set up is very common in iPSC studies, where multiple differentiations…

Comment: DESeq2 test for synergistic vs additive effects by Jay • 0

Why is TrtAB - TrtA - TrtB + Control "not really a thing"? i came to this forum answer when attempting to use EdgeR to answer a similar que…

Comment: NCBI protein conversion to CDNA and NCBI gene (in R) by Gordon Smyth 48k

Continuation of https://support.bioconductor.org/p/9155428/

Comment: Why is DMRcate not available for Bioconductor version 3.18? by Tim Peters ▴ 150

Thanks Daniel, Gordon and Lori for flagging this. DSS is only needed for the vignette so I'll remove that section, plus the dependency, som…

Comment: NCBI protein to NCBI cDNA (Ensembl conversions would be great as well) in R by R_Page • 0

Thank you, this works well. As for CDNA, I figured out what I need to find, and have made a new post regarding it.

Votes

Answer: Confused about the CPM and TMM normalization in edgeR

Answer: Differential gene expression analysis

Comment: Why is DMRcate not available for Bioconductor version 3.18?

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