Log In
Sign Up
about
faq
Ask a question
Latest
News
Jobs
Tutorials
Tags
Users
New Post
Latest
News
Jobs
Tutorials
Tags
Users
Log In
Sign Up
About
Limit
all time
today
this week
this month
this year
Unanswered
All posts
Sort
Update
Answers
Bookmarks
Creation
Replies
Rank
Views
Votes
Showing :
ebayes
•
reset
6
votes
4
replies
1.1k
views
Limma outputs different results for same sample?
topTable
MicroarrayData
ebayes
limma
Microarray
2.8 years ago
snijesh
▴ 20
0
votes
5
replies
1.0k
views
eBayes options and decideTests method
limma
eBayes
decideTests
topTable
updated 3.8 years ago by
Gordon Smyth
48k • written 3.8 years ago by
irene.roman
• 0
0
votes
6
replies
1.4k
views
eBayes(fit_object, trend = T) gives: Error in fitFDist(var, df1 = df, covariate = covariate) : NA covariate values not allowed
limma
eBayes
updated 4.8 years ago by
Gordon Smyth
48k • written 4.8 years ago by
Sebastian Hesse
▴ 70
3
votes
1
reply
1.3k
views
Limma without eBayes, is it indistunguishable from Ordinary Least Square?
Limma
ebayes
bayesian
ls
updated 5.2 years ago by
Gordon Smyth
48k • written 5.2 years ago by
CantExitVIM
▴ 10
1
vote
7
replies
1.4k
views
model.matrix from GDS data
model.matrix
lmFit
eBayes
GEOquery
limma
5.8 years ago
darthratus
• 0
1
vote
2
replies
1.3k
views
Limma Ebayes on SILAC data
ebayes
limma
bioconductor
updated 6.1 years ago by
Gordon Smyth
48k • written 6.1 years ago by
reventropy2003
▴ 10
0
votes
6
replies
1.9k
views
Error in last step of Limma analysis (eBayes)
ebayes
limma
6.1 years ago
peirinl
• 0
1
vote
3
replies
1.5k
views
Error from eBayes in limma package
eBayes
limma
error
updated 6.4 years ago by
James W. MacDonald
64k • written 6.4 years ago by
calen.p.ryan
• 0
2
votes
2
replies
1.3k
views
Can one get LSMeans and expression confidence intervals from limma and voom?
ebayes
limma
voom
6.8 years ago
bag59
• 0
4
votes
2
replies
1.8k
views
error in Limma analysis - estimated df (df.0) for prior value of variance (s2.post) is Inf
limma
ebayes
updated 7 months ago by
Gordon Smyth
48k • written 6.9 years ago by
cemcdono
• 0
1
vote
1
reply
845
views
Limma ebayes function error without any messages
limma
ebayes
updated 8.1 years ago by
Aaron Lun
★ 28k • written 8.1 years ago by
bharata1803
▴ 60
3
votes
3
replies
1.6k
views
Sub : Limma ebayes
limma
ebayes
statistical inference
updated 8.3 years ago by
Gordon Smyth
48k • written 8.3 years ago by
ssrajan86
• 0
0
votes
1
reply
1.2k
views
LmFit and eBayes on merged ESET giving errors
limma
eset
error
ebayes
updated 8.4 years ago by
James W. MacDonald
64k • written 8.4 years ago by
Vani
▴ 20
6
votes
5
replies
1.6k
views
Limma ebayes returns a list with Affy pd.hugene.2.0.st arrays
ebayes
expression
affymetrix
pd.hugene.2.0.st
limma
updated 8.9 years ago by
Gordon Smyth
48k • written 8.9 years ago by
Paulo Nuin
▴ 200
14 results • Page
1 of 1
Recent ...
Replies
Comment: DESeq2 - groups with biological replicates from the same patient
by
Oscar
• 0
Thanks James for your helpful response. This particular experimental set up is very common in iPSC studies, where multiple differentiations…
Comment: DESeq2 test for synergistic vs additive effects
by
Jay
• 0
Why is TrtAB - TrtA - TrtB + Control "not really a thing"? i came to this forum answer when attempting to use EdgeR to answer a similar que…
Comment: NCBI protein conversion to CDNA and NCBI gene (in R)
by
Gordon Smyth
48k
Continuation of https://support.bioconductor.org/p/9155428/
Comment: Why is DMRcate not available for Bioconductor version 3.18?
by
Tim Peters
▴ 150
Thanks Daniel, Gordon and Lori for flagging this. DSS is only needed for the vignette so I'll remove that section, plus the dependency, som…
Comment: NCBI protein to NCBI cDNA (Ensembl conversions would be great as well) in R
by
R_Page
• 0
Thank you, this works well. As for CDNA, I figured out what I need to find, and have made a new post regarding it.
Votes
Answer: Confused about the CPM and TMM normalization in edgeR
Answer: Differential gene expression analysis
Comment: Why is DMRcate not available for Bioconductor version 3.18?
Comment: Why is DMRcate not available for Bioconductor version 3.18?
Comment: Why is DMRcate not available for Bioconductor version 3.18?
Awards
• All
Popular Question
to
Poonam
• 0
Scholar
to
James W. MacDonald
64k
Scholar
to
Assa Yeroslaviz
★ 1.5k
Popular Question
to
Gordon Smyth
48k
Popular Question
to
Endre Sebestyén
▴ 70
Locations
• All
EMBL Heidelberg,
3 minutes ago
Egypt,
18 minutes ago
United Kingdom,
32 minutes ago
WEHI, Melbourne, Australia,
1 hour ago
United States,
1 hour ago
Traffic: 538 users visited in the last hour
Content
Search
Users
Tags
Badges
Help
About
FAQ
Access
RSS
API
Stats
Use of this site constitutes acceptance of our
User Agreement and Privacy Policy
.
Powered by the
version 2.3.6