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2.2k
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Answer:
A: monocle: Error in if (cds@expressionFamily@vfamily %in% c("negbinomial", "negbin
7.0 years ago
Mehmet Ilyas Cosacak
• 0
0
votes
1
reply
2.2k
views
monocle: Error in if (cds@expressionFamily@vfamily %in% c("negbinomial", "negbinomial.size"))
monocle
7.0 years ago
Mehmet Ilyas Cosacak
• 0
0
votes
0
replies
1.1k
views
Comment:
C: different statiscal results in DESeq2 from the same samples
7.3 years ago
Mehmet Ilyas Cosacak
• 0
0
votes
1
reply
1.1k
views
Comment:
C: different statiscal results in DESeq2 from the same samples
7.3 years ago
Mehmet Ilyas Cosacak
• 0
0
votes
1
reply
1.1k
views
Comment:
C: different statiscal results in DESeq2 from the same samples
7.3 years ago
Mehmet Ilyas Cosacak
• 0
2
votes
6
replies
1.1k
views
different statiscal results in DESeq2 from the same samples
deseq2
updated 7.3 years ago by
Michael Love
43k • written 7.3 years ago by
Mehmet Ilyas Cosacak
• 0
0
votes
0
replies
1.2k
views
Comment:
C: library size and fold changes
8.4 years ago
Mehmet Ilyas Cosacak
• 0
0
votes
0
replies
1.7k
views
refGenome: Error in `row.names<-.data.frame`(`*tmp*`, value = value) : duplicate 'row.names' are not allowed
refGenome
geneList
8.5 years ago
Mehmet Ilyas Cosacak
• 0
0
votes
0
replies
1.8k
views
Comment:
C: Plotting only intergenic reads on chromosomes?
8.5 years ago
Mehmet Ilyas Cosacak
• 0
3
votes
2
replies
1.8k
views
Plotting only intergenic reads on chromosomes?
gviz
GenomeGraphs
BAM
rsamtools
samtools
updated 8.5 years ago by
Martin Morgan
25k • written 8.6 years ago by
Mehmet Ilyas Cosacak
• 0
0
votes
0
replies
1.6k
views
Comment:
C: limma & design matrix: for 2-color dyes and 4-comparisons?
8.7 years ago
Mehmet Ilyas Cosacak
• 0
6
votes
5
replies
1.6k
views
limma & design matrix: for 2-color dyes and 4-comparisons?
limma
microarray
limma design matrix
updated 8.7 years ago by
Gordon Smyth
52k • written 8.7 years ago by
Mehmet Ilyas Cosacak
• 0
0
votes
1
reply
1.6k
views
Comment:
C: limma & design matrix: for 2-color dyes and 4-comparisons?
8.7 years ago
Mehmet Ilyas Cosacak
• 0
0
votes
0
replies
2.5k
views
Comment:
C: microarray data analsis with limma?
8.8 years ago
Mehmet Ilyas Cosacak
• 0
0
votes
1
reply
2.5k
views
Comment:
C: microarray data analsis with limma?
8.8 years ago
Mehmet Ilyas Cosacak
• 0
0
votes
0
replies
2.5k
views
Comment:
A: microarray data analsis with limma?
8.8 years ago
Mehmet Ilyas Cosacak
• 0
6
votes
11
replies
2.5k
views
microarray data analsis with limma?
limma
genepix
microarray
agilent microarrays
8.8 years ago
Mehmet Ilyas Cosacak
• 0
0
votes
1
reply
2.5k
views
Comment:
C: microarray data analsis with limma?
8.8 years ago
Mehmet Ilyas Cosacak
• 0
0
votes
1
reply
2.5k
views
Comment:
C: microarray data analsis with limma?
8.8 years ago
Mehmet Ilyas Cosacak
• 0
0
votes
1
reply
1.5k
views
Comment:
C: Can we use Entrez IDs for GOSeq?
8.8 years ago
Mehmet Ilyas Cosacak
• 0
2
votes
3
replies
1.5k
views
Can we use Entrez IDs for GOSeq?
goseq
entrez gene identifiers
updated 8.8 years ago by
James W. MacDonald
68k • written 8.8 years ago by
Mehmet Ilyas Cosacak
• 0
0
votes
0
replies
1.1k
views
Comment:
C: toTable(org.Dr.egGO) into a data.frame with unique gene_id and all ensembl_ids i
8.9 years ago
Mehmet Ilyas Cosacak
• 0
2
votes
2
replies
1.1k
views
toTable(org.Dr.egGO) into a data.frame with unique gene_id and all ensembl_ids in one column
org.Dr.egGO org.Dr.eg.db ToTable
updated 8.9 years ago by
James W. MacDonald
68k • written 8.9 years ago by
Mehmet Ilyas Cosacak
• 0
0
votes
0
replies
2.0k
views
Comment:
C: danRer10 is missing in geneLenDataBase
9.0 years ago
Mehmet Ilyas Cosacak
• 0
0
votes
1
reply
2.0k
views
Comment:
C: danRer10 is missing in geneLenDataBase
9.0 years ago
Mehmet Ilyas Cosacak
• 0
0
votes
4
replies
2.0k
views
danRer10 is missing in geneLenDataBase
genelendatabase
goseq
updated 9.0 years ago by
Nadia Davidson
▴ 320 • written 9.0 years ago by
Mehmet Ilyas Cosacak
• 0
0
votes
0
replies
2.4k
views
Comment:
C: Error in exp(alleffects) : non-numeric argument to mathematical function
9.2 years ago
Mehmet Ilyas Cosacak
• 0
0
votes
1
reply
2.4k
views
Comment:
C: Error in exp(alleffects) : non-numeric argument to mathematical function
9.2 years ago
Mehmet Ilyas Cosacak
• 0
0
votes
4
replies
2.4k
views
Error in exp(alleffects) : non-numeric argument to mathematical function
dexseq
estimateExonFoldChanges
updated 9.2 years ago by
Alejandro Reyes
★ 1.9k • written 9.2 years ago by
Mehmet Ilyas Cosacak
• 0
0
votes
0
replies
1.4k
views
Comment:
C: Create Db for exon starts/ends using rtracklayer
9.3 years ago
Mehmet Ilyas Cosacak
• 0
1
vote
2
replies
1.4k
views
Create Db for exon starts/ends using rtracklayer
rtracklayer
gtf
9.3 years ago
Mehmet Ilyas Cosacak
• 0
0
votes
0
replies
2.3k
views
Comment:
C: estimateSizeFactors first or later?
9.3 years ago
Mehmet Ilyas Cosacak
• 0
0
votes
3
replies
2.3k
views
estimateSizeFactors first or later?
estimatesizefactors
deseq2
updated 9.4 years ago by
Michael Love
43k • written 9.4 years ago by
Mehmet Ilyas Cosacak
• 0
33 results • Page
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