Bioconductor Entrez gene identifiers

Showing : entrez gene identifiers • reset

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2.0k

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biomart entrez gene identifiers ensembl conversion

updated 5.4 years ago by Mike Smith ★ 6.5k • written 5.4 years ago by EdgeR_A_Poe ▴ 10

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2.4k

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biomart ensembl entrez gene identifiers

updated 5.7 years ago by James W. MacDonald 65k • written 5.7 years ago by rina ▴ 30

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12k

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org.hs.eg.db entrez gene identifiers genesymbols

updated 6.2 years ago by mat149 ▴ 70 • written 6.2 years ago by imalumberjack ▴ 10

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2.9k

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bioconductor biomart entrez gene identifiers ensembl ensembl mart

updated 7.1 years ago by Thomas Maurel ▴ 800 • written 7.1 years ago by daniel.carbajo • 0

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1.8k

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org.Hs.eg.db entrez gene identifiers ensemble

updated 7.2 years ago by James W. MacDonald 65k • written 7.2 years ago by Marcus Aurelius • 0

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2.0k

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getBM entrez gene identifiers duplicate rnaseq

7.3 years ago Jose Luis Soto Vázquez • 0

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1.3k

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goseq entrez gene identifiers

updated 8.0 years ago by James W. MacDonald 65k • written 8.0 years ago by Mehmet Ilyas Cosacak • 0

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1.2k

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biomart ensembl ensemble mart entrez gene identifiers

8.2 years ago serpalma.v ▴ 60

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1.0k

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mta10 entrez gene identifiers

updated 8.4 years ago by James W. MacDonald 65k • written 8.4 years ago by jacorvar ▴ 40

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13k

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org.hs.eg.db uniprot accessions entrez gene identifiers

updated 8.7 years ago by James W. MacDonald 65k • written 8.7 years ago by Aditya ▴ 160

10 results • Page 1 of 1

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Answer: PCA plot suggestions by Michael Love 41k

For help with interpretation and design of analysis, I recommend working with a local statistician. Due to time restrictions, I can only…

Comment: DESeq2 Error in `.rowNamesDF<-`(x, value = value): Invalid 'row.names' length by ussarizona ▴ 10

Hi Michael, Yes, I could figure it out what does the error mean. In my matrix I had the first colum GeneID while in my condition I only h…

Answer: Deseq2. decontXcounts not integers. Useful alternative? by Michael Love 41k

Another option would be to put the per sample estimated contamination in the design. This is for example how RUV etc help remove spurious D…

Answer: ATACseq merge peaks by ATpoint ★ 4.0k

That depends on your analysis. Typically, for differential analysis (and convenience) you would produce a single set of peaks (e.g. by merg…

Comment: Deseq2. decontXcounts not integers. Useful alternative? by camp ▴ 10

Yes, @atpoint is correct. decontX decontaminated counts are not integers due to the way the variation inference algorithm works, but you ca…

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Comment: DESeq2 Error in `.rowNamesDF<-`(x, value = value): Invalid 'row.names' length