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Created A Post With More Than 5 Votes
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following contributors:
3 years, 9 months ago
United States
Removing batch effects with sva and combat using the sva package
3 years, 9 months ago
United States
Announcing Docker containers for Bioconductor
3 years, 9 months ago
United States
A: What is the best way to get help on Bioconductor packages?
3 years, 10 months ago
Australia
Bioconductor Community Advisory Board Nominees
3 years, 10 months ago
United States
Orchestrating a small, parallel, RNA-seq pre-processing workflow using R
3 years, 11 months ago
Seattle
it paused in line **byte-compile and prepare package for lazy loading** when install package EnsDb.Hsapiens.v75
3 years, 11 months ago
3 years, 11 months ago
3 years, 11 months ago
3 years, 11 months ago
United States
A: heatmap.2() get matrix after hierarchical clustering
4 years ago
WEHI, Melbourne, Australia
A: Possible ways of performing differential gene expression and analysis of RNA-Seq
4 years ago
Italy
A: How to map all Ensembl IDs to Gene Symbols- Problem with AnootationDbi
4 years, 1 month ago
Germany
A: could not find symbol "keepNA" in environment of the generic function
4 years, 1 month ago
United States
A: Using RNA-Seq raw count data in Weighted Gene Co-Expression Network Analysis
4 years, 1 month ago
Germany
A: Plot ggplot2 and ggbio Images Together
4 years, 1 month ago
EMBL Heidelberg
A: Error: Bioconductor version '3.8' requires R version '3.5'
4 years, 1 month ago
EMBL Heidelberg
A: R: error while reading .h5 files from R using rdhf5 package
4 years, 1 month ago
WEHI, Melbourne, Australia
A: Appropriate ways to filter counts data for voom/limma
4 years, 1 month ago
WEHI, Melbourne, Australia
A: Fit a multinomial to RNA-seq count data
4 years, 1 month ago
WEHI, Melbourne, Australia
A: Using voomWithQualityWeights for differential expression analysis.
4 years, 1 month ago
WEHI, Melbourne, Australia
A: Differential expression analysis starting from TPM data
4 years, 1 month ago
WEHI, Melbourne, Australia
A: How to remove more than two batches in my data-sets
4 years, 1 month ago
WEHI, Melbourne, Australia
A: EdgeR cpm: factor of 2 when adjusting library size?
4 years, 1 month ago
WEHI, Melbourne, Australia
A: How barcode-plot enrichment is calculated?
4 years, 1 month ago
WEHI, Melbourne, Australia
A: Different logFC (log2foldchange) values for genes from limma-voom and other too
4 years, 1 month ago
WEHI, Melbourne, Australia
A: when to apply quantile normalization with voom in limma/voom framework with RNA-
4 years, 1 month ago
WEHI, Melbourne, Australia
A: correcting the batch effects in Limma and SVA
4 years, 1 month ago
WEHI, Melbourne, Australia
A: Do the outputs of Limma's competitive gene set methods (camera, romer) require a
4 years, 1 month ago
WEHI, Melbourne, Australia
A: Normalization methodology in DESeq/DESeq2 vs edgeR
4 years, 1 month ago
WEHI, Melbourne, Australia
A: Correct assumptions of using limma moderated t-test
4 years, 1 month ago
WEHI, Melbourne, Australia
A: Removing continuous covariate effects in limma analysis
4 years, 1 month ago
WEHI, Melbourne, Australia
A: Statistical analysis of Spectral count data : edgeR, limma or others ?
4 years, 1 month ago
WEHI, Melbourne, Australia
A: Confidence intervals on edgeR logFC
4 years, 1 month ago
WEHI, Melbourne, Australia
A: DESeq and Limma+Voom Normalization for Rna-Seq Data Using Ercc Spike-In
4 years, 1 month ago
WEHI, Melbourne, Australia
A: conceptual question about FDR, FDR adjusted p-value and q-value
4 years, 1 month ago
WEHI, Melbourne, Australia
limma moderated t-statistics and B-statistics
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