Bioconductor AUCell

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AUCell AUcell

19 months ago • updated 18 months ago Lucy ▴ 60

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AUCell

updated 2.4 years ago by ATpoint ★ 4.7k • written 2.4 years ago by Lucy ▴ 60

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RcisTarget aucell SCENIC

updated 6.7 years ago by Martin Morgan 25k • written 6.7 years ago by jka8119 ▴ 10

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AUCell SCENIC

updated 6.8 years ago by sara.aibar ▴ 10 • written 6.8 years ago by Xingyu • 0

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Answer: Loading Ensembl 98 EnsDb from Annotation Hub fails with database disk image malf by shepherl 4.1k

What is your `sessionInfo()`? I just tried locally and it works fine so there might have been a bad or interrupted download when initially…

Comment: error in ChAMP loading file by shocked.tick.zyet • 0

Great troubleshooting steps for ChAMP import issues! "ChAMP methylation data import errors" on [Google Search][1] for similar cases. Header…

Comment: orgDB by jenniferping36 • 0

Thanks for the suggestion! I'll check out the resources.

Comment: sesameDataCache is not work properly on my system by Samreen • 0

Any luck with this? I have tried all of the above and it still doesn't work. This is my session info and I'm on a cluster computing environ…

Answer: Using tximport for kallisto aligned TOIL data by James W. MacDonald 68k

If you just have the transcript data, you probably don't need (and maybe cannot use) `tximport`. Instead you could just do the naive thing …

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