Bioconductor Affy

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GEO affy

6 weeks ago • updated 5 weeks ago Kurtis • 0

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maplot_function rma_function ExpressionSet MicroarrayData affy

7 weeks ago Mj.A. • 0

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frmaTools affy

updated 12 weeks ago by James W. MacDonald 65k • written 12 weeks ago by michelafrancesconi8 • 0

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Pathways probe affy Pathways probe affy

written 17.7 years ago by mike Ad. ▴ 30

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Annotation affy oligo ffpe Annotation affy oligo ffpe

written 10.4 years ago by Guest User ★ 13k

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Bioconductor Install affy

updated 6 months ago by ATpoint ★ 4.1k • written 17 months ago by laujihen • 0

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639

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crlmm hapmapsnp6 genomewidesnp6Crlmm affy

updated 10 months ago by Kevin Blighe ★ 3.9k • written 10 months ago by Vincent J. Carey, Jr. 6.7k

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affy affy

updated 10 weeks ago by Gordon Smyth 50k • written 19.1 years ago by SAURIN ★ 1.1k

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multtest affy multtest affy

updated 9 months ago by Amruta • 0 • written 20.7 years ago by Bob ▴ 20

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Comment: Ensembl plants at annotationHub? by Daniele • 0

Dear Johannes, Would it be possible to create the EnsDb for Triticum aestivum (IWGSC)? Thank you very much, Daniele

Comment: How can I create a eigencorplot of pca created from deseq2 object with PCAtools by BioinfGuru ▴ 30

Figured it out with ?eigencorplot, thanks Michael. I was trying to pass 10 PCs when I only had 8, and I was including metadata columns that…

Answer: DECIPHER::idTaxa - broken link to download GTDB r220 (modified) trainig set by makala • 0

Thanks a lot!

Comment: DECIPHER::idTaxa - broken link to download GTDB r220 (modified) trainig set by Erik Wright ▴ 150

Thanks for notifying us of this broken link. It should be fixed on the Downloads page now. [1] [1]: http://www2.decipher.codes/Classificat…

Answer: Importing a GraphNEL into Cytoscape with RCy3 with error: "Error in cyrestPUT(pa by Matthew Thornton ▴ 360

So it turns out that if the count and the size are the same in 'GOstats", the odds ratio is 'inf'. These are causing the issue. Thank you!!

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Comment: How can I create a eigencorplot of pca created from deseq2 object with PCAtools

Answer: Importing a GraphNEL into Cytoscape with RCy3 with error: "Error in cyrestPUT(pa

Rsubread counting peaks ATACseq

Comment: Can DESeq2 rlog normalized matrix reflects time course result directly?

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