Bioconductor BSgenome.Hsapiens.UCSC.hg19

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BSgenome.Hsapiens.UCSC.hg19

updated 3.1 years ago by Cheyujlee • 0 • written 3.4 years ago by pegah.taklifi ▴ 30

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BSgenome.Hsapiens.UCSC.hg19 HarvardX Introduction to Bioconductor

updated 22 months ago by James W. MacDonald 65k • written 3.7 years ago by m.steinruecke • 0

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BSgenome.Hsapiens.UCSC.hg19 AnnotationDbi

6 months ago Erica • 0

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ucsc bsgenome.hsapiens.ucsc.hg19

updated 8.2 years ago by Martin Morgan 25k • written 8.2 years ago by Sushant Pawar • 0

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BSgenome.Hsapiens.UCSC.hg19 rtracklayer AnnotationHub

20 months ago Lenny186 • 0

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BSgenome.Hsapiens.UCSC.hg19

updated 2.1 years ago by Hervé Pagès 16k • written 2.1 years ago by Bogdan ▴ 670

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bsgenome.hsapiens.ucsc.hg19 hg19

updated 6.5 years ago by Mike Smith ★ 6.5k • written 6.5 years ago by addyS • 0

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BSgenome.Hsapiens.UCSC.hg19

updated 8.5 years ago by Hervé Pagès 16k • written 8.5 years ago by Julie Zhu ★ 4.3k

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matchProbePair BSgenome Biostrings BSgenome.Hsapiens.UCSC.hg19

updated 5.0 years ago by James W. MacDonald 65k • written 5.0 years ago by svetlana.gorokhova • 0

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Comment: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it by Hervé Pagès 16k

Indeed. Calculations involving floating point arithmetic are architecture-dependent, and testing the results should be done with `all.equal…

Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package) by Poonam • 0

I will follow what you suggested. I didn't use max gap anywhere. I was following statistic I and regarding the size of features, my small…

Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package) by Michael Love 42k

Oh I see, for the second question, I don't have a great answer. I typically think of one set as the anchor, whose ascertainment is driving …

Comment: Help with running egsea() by James W. MacDonald 65k

Oh, right. Ideally you would use NCBI (aka Entrez gene) IDs because they are way more likely to be unique. Gene symbols are broken down int…

Comment: Help with running egsea() by Chris • 0

Thanks James! I update the question. The last question mean when we use `buildIdx()`, could we use gene symbol instead of entrezID. However…

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Answer: How to save the DEXSeq results

Answer: minfi support of illumina Infinium methylationEPIC v2.0

Comment: minfi support of illumina Infinium methylationEPIC v2.0

Answer: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it

Comment: Help with running egsea()

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