Showing : BiocFileCache • reset
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Importing more than 100,000 at once into BiocFileCache
BiocFileCache
updated 15 days ago by ★ 5.1k • written 16 days ago by • 0
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2
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221
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Failure to save txDb using saveDb in BiocFileCache location other than /tmp
tximeta BiocFileCache
updated 5 months ago by 34k • written 5 months ago by • 0
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News: Updates to BiocFileCache, AnnotationHub, and ExperimentHub
BiocFileCache AnnotationHub ExperimentHub cache
5 months ago shepherl 2.8k
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3
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How to keep remote file name by bfcadd in BiocFileCache?
BiocFileCache
updated 18 months ago by 2.8k • written 18 months ago by ▴ 70
4 results • Page 1 of 1
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Comment: How similar or disimilar are two sets of DEG? by ATpoint ▴ 850
Sounds like a job for gene set enrichment analysis, e.g. via http://bioconductor.org/packages/release/bioc/html/fgsea.html That will check…
Comment: Correct annotation of DGEList object from edgeR package regarding an RNA-Seq dat by IIart.hubII • 0
What is "coad_clear" in this case? What data have you allotted to it? Can you please share the whole code? Or can anyone answer this questi…
Comment: GenomicScores package: availableGScores and getGScores functions not working by Robert Castelo ★ 2.7k
hi, Indeed you were using an outdated version of the package. Regarding how to install current release version, please read first carefull…
Answer: Unable to install Bioconductor packages by shepherl 2.8k
This normally occurs when R was installed with a different account or an admin account. Unless on this account you won't be able to update…
Comment: GenomicScores package: availableGScores and getGScores functions not working by nattzy94 • 0
I tried to install the latest version of GenomicScores (2.4.0) by downloading the tar.gz and running `install.packages('GenomicScores_2.4.0…
Votes
A: Differential expression analysis starting from TPM data
Comment: deseq2 machine sizing best practices for very large data set
Comment: Extracting normalized counts in MEDIPS
Comment: "full model matrix is less than full rank"
A: Extracting normalized counts in MEDIPS
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