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COHCAP
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Error while using COHCAP pipeline for 450k methylation data analysis
r
cohcap
450k methylation
5.3 years ago
sayamsmruti
• 0
0
votes
0
replies
1.7k
views
COHCAP Perl error while running commands
cohcap
Perl
7.3 years ago
poojitha.stemcell
▴ 10
1
vote
2
replies
987
views
Correlating DNA methylation and Illumina gene expression microarray data
microarray
HM450
dna methylation
cohcap
updated 7.3 years ago by
James W. MacDonald
65k • written 7.3 years ago by
poojitha.stemcell
▴ 10
0
votes
0
replies
910
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Problem annotating with COHCAP 1.16.0 in MacOsX
illimina 450k methylation
RNA-seq
COHCAP
7.4 years ago
IOM
▴ 20
4 results • Page
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Answer: Error while installing BiocManager::install("org.Vdahliae.eg.db")
by
Marcel Ramos
690
`BiocManager` does not install local packages. It only installs Bioconductor, CRAN, and GitHub ones. You should install local packages w…
Comment: error running enricher from clusterprofiler
by
Yael
• 0
It worked!!! Thanks alot, i think something in the gene_list wasnt right... Thanks agian
Comment: Create protein sequences including variants from a VCF file
by
Yun
• 0
This cannot work for a SNV file, since `injectSNPs` need a `SNPlocs` object
Comment: Can log2cpm be used for proteomics data normalization?
by
Daniel
• 0
Thank you for the quick reply and I apologize for it being on the wrong thread but the "post tag" function wasn't working properly.
Comment: Error while installing BiocManager::install("org.Vdahliae.eg.db")
by
Patadù
▴ 10
I have arranged the code again following the other post and also the script you suggested. Now, I managed to install `org.Vdahliae.eg.db`. …
Votes
Comment: Error while installing BiocManager::install("org.Vdahliae.eg.db")
Answer: Trim/Filter out-of-bounds GRanges
Comment: How to correctly adjust for gender in edgeR
Create protein sequences including variants from a VCF file
A: DEXSeq design formula
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