Showing : ChipQCReport • reset
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Unhelpful Errors Running ChIPQC on Computing Cluster
chipqc chipqcreport
6.7 years ago • updated 6.6 years ago jared.andrews07 ▴ 30
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ChIPQC installation does not force latest DiffBind version
chipqc diffbind chipqcreport
updated 6.9 years ago by ▴ 420 • written 6.9 years ago by ▴ 50
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ChIPQC : ChIPQCreport(experiment) swap memory overload
ChIPQC ChIPQCreport
updated 6.9 years ago by ▴ 420 • written 6.9 years ago by ▴ 50
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Error computing metrics with ChIPQC (Bioconductor v3.5, ChIPQC v2.1.12)
chipqc chipqcreport
updated 6.9 years ago by ▴ 420 • written 6.9 years ago by • 0
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ChIPQCreport Total number of duplicates differs from multiqc/fastqc & RelCC is Inf
ChIPQC ChIPQCreport
updated 6.9 years ago by ▴ 420 • written 6.9 years ago by ▴ 50
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ChipQCreport coverage plot failure?
ChipQC chipqcreport
5.7 years ago tapio.envall • 0
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ChIPQC - can't read in bam files
chipqc chipqcreport
5.6 years ago molly_the_minotaur ▴ 30
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529
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Empty ChipQC Report
ChipQCReport
updated 15 months ago by • 0 • written 17 months ago by • 0
8 results • Page 1 of 1
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Answer: SGSeq: moving toward diffex from SGSeq analysis by Leonard Goldstein ▴ 200
`vid` and `eid` are unique identifiers for splice variants and splicing events respectively. They are analogous to exon bin and gene identi…
Comment: Help with error using camera() in limma by Chris • 0
Thanks James! I fixed the error. I try gene symbol instead of entrez and it worked.
Comment: limma for gene expression analysis with big and unbalanced sample size by XW • 0
Could you explain more about the comment "there are no problems with using limma for unbalanced data sets" ? thanks.
Comment: Limma, eBayes different sample size of groups and adjustment by XW • 0
Could you explain more about how the analysis self-correct the different sample sizes when calling DEGs in limma? Thanks
Answer: How do I select a GC file (gc.wig)? (How to determine the inputdata of HMMcopy) by James W. MacDonald 65k
The section of the vignette that is *directly above the one you quote* says that you can use the HMMcopy utils to do all three things. And …
Votes
C: How to establish a subset from TxDb.Hsapiens.UCSC.hg38.knownGene DB
C: Extremely big genes in annotation TxDb packages
Make custom Txdb class objects from Txdb
Comment: Help with error using camera() in limma
Answer: Help with error using camera() in limma
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