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CpG
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reset
3
votes
2
replies
1.3k
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What is the meaning of "CpG interrogation" and "single nucleotide extension(SBE)"?
SBE
CpG
minfi
CpGinterrogation
22 months ago • updated 21 months ago
kyj2226
• 0
0
votes
0
replies
576
views
CpG coverage with MEDIPS
MEDIPS
CpG
2.1 years ago
greta
• 0
0
votes
4
replies
1.8k
views
CpG density in MEDIPS
CpG
MEDIPS
7.0 years ago
saripalligautam86
▴ 10
0
votes
3
replies
2.0k
views
CpG site not annotated with annotatr
annotatr
cpg
updated 7.0 years ago by
rcavalca
▴ 140 • written 7.0 years ago by
soli5
• 0
0
votes
1
reply
1.8k
views
CpG Sites // CG dinucleotides
CpG
CpG sites
CpG dinucleotides
updated 8.1 years ago by
Hervé Pagès
16k • written 8.1 years ago by
ibetfer3
• 0
1
vote
1
reply
7.6k
views
How to get the all CpG sites genome postion for hg19
CpG
updated 8.4 years ago by
James W. MacDonald
68k • written 8.4 years ago by
ericotorrieri
• 0
0
votes
3
replies
2.7k
views
Compute the CpG content for all chromosome like the percentage of G+C
CpG
10.6 years ago • updated 10.5 years ago
Tiphaine Martin
▴ 40
7 results • Page
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Comment: incomplete imputation of missing values with LEA impute() function
by
Gordon Smyth
53k
Nadia, please tag your question with the name of the package ("LEA") that you are asking about. "impute" is the name of a different Biocond…
Comment: Sharing a collection of datasets in ExperimentHub
by
Aaron Lun
★ 29k
FYI the **scRNAseq** packages uses a non-ExperimentHub storage platform, see [here](https://github.com/ArtifactDB/gypsum-worker) for more d…
Comment: Error Loading Experiment from SimBenchData Package
by
ATpoint
★ 4.9k
Is the Seurat package installed? The error somewhat suggests that it could be related, and at https://www.bioconductor.org/packages/release…
Answer: Help with defining groups
by
Gordon Smyth
53k
Defining sample groups is separate to reading in the DIA-NN data, because the sample conditions and covariates are not necessarily coded in…
Comment: Sharing a collection of datasets in ExperimentHub
by
Peter Hickey
▴ 760
The [**scRNAseq**](https://bioconductor.org/packages/scRNAseq/) package ([source on GitHub](https://github.com/LTLA/scRNAseq)) might serve …
Votes
Comment: incomplete imputation of missing values with LEA impute() function
Answer: Expected memory usage for analyzing large single-cell seq datasets (> 450,000 ce
Answer: ordinary t from limma [was: How would I normally compare swirl?]
Comment: readDNAStringSet with non DNA characters
Comment: Guidance on limma for pseudobulk scRNA-seq with multi-factor design
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