Bioconductor Cydar

Showing : Cydar • reset

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1.0k

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cydar

updated 5.6 years ago by Aaron Lun ★ 29k • written 5.6 years ago by thkapell ▴ 10

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2.4k

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Cydar CyTOF normalization

updated 6.1 years ago by Aaron Lun ★ 29k • written 6.1 years ago by ghogg • 0

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1.6k

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cydar mass cytometry

updated 6.4 years ago by Aaron Lun ★ 29k • written 6.4 years ago by kenneth.baker • 0

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2.1k

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Cydar normalization normalizeBatch

updated 6.6 years ago by Aaron Lun ★ 29k • written 6.6 years ago by Florent ▴ 10

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1.5k

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cydar CyTOF

updated 6.7 years ago by Aaron Lun ★ 29k • written 6.7 years ago by mikhael.manurung ▴ 280

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1.3k

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cydar

8.3 years ago Lukas Weber • 0

6 results • Page 1 of 1

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Answer: Integration: Paired-end vs healthy single-end from a different source by wba64023 • 0

Interesting comparison! The source differences can definitely impact read quality and bias. Curious to see how you handle normalization bet…

Comment: Could we detect difference at pathway level but not significant different at gen by wba64023 • 0

thanks for sharing! [slope 2][1] [1]: https://slope2.online

Comment: After running samtools, the featureCounts command crashed. by eja.gssssse.r.m • 0

The buffer overflow detected error in your featureCount step usually indicates that the program is trying to write more data into memory …

Comment: gene Set with high AUC score but no cells assigned to cell type by eja.gssssse.r.m • 0

It sounds like your AUCell results may be showing high AUC scores without cell assignment due to thresholding or scoring cutoffs. Think of …

Answer: "Watched Tags" are being erased rather than updated by shepherl 4.2k

This should now be resolved

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Bioconductor 3.22 Released!

Comment: "Watched Tags" are being erased rather than updated

Comment: deseq2 filter the low counts

Answer: DESeq2 interactions

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