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Cytometry
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969
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Mapping patient dataset onto control dataset
Cytometry
R
Data
3.4 years ago
hamiltond
▴ 10
2
votes
2
replies
3.0k
views
How to append cluster and UMAP data to a flowSet?
flow
cytometry
flowSet
UMAP
.fcs files
updated 6.3 years ago by
mikhael.manurung
▴ 280 • written 6.3 years ago by
s.lucasblack
• 0
0
votes
1
reply
2.1k
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Extract the gate in the data file (fcs file) from MoFlo Astrios
gate
cytometry
experimentdata
stategy
MoFlo Astrios
8.8 years ago
cr
• 0
3
votes
0
replies
2.1k
views
An appeal to flow cytometry tools users
flow
flowcore
flowworkspace
cytometry
gating
8.8 years ago
Greg Finak
▴ 240
4 results • Page
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Replies
Answer: Must I do pseudobulk analysis on Cell Surface Protein Labeling data of Single C
by
ATpoint
★ 5.0k
There is no "MUST", but pseudobulk aggregation is beneficial to a) enable use of tested and robust methods such as limma (though it could u…
Answer: Post translational modifications and phosphoproteomics in limpa?
by
Gordon Smyth
53k
Yes, we use limpa for PTMs ourselves. I assume your data is preprocessed so that each row corresponds to a PTM. You replace dpcQuant() with…
Comment: What R/Bioconductor tools would you recommend for the analysis of sncRNA, specif
by
Matthew Thornton
▴ 380
WOW! Thank you so much for the information. I will do this.
Comment: "Watched Tags" are being erased rather than updated
by
RalphSavage99
• 0
Thanks for sharing https://github.com/Bioconductor/support.bioconductor.org/issues/112
Answer: Add additional maintainer for MOFA2
by
shepherl
4.2k
These requests are best on the bioc-devel @ r-project.org or a request to maintainer @ bioconductor.org -- We would ideally need the curre…
Votes
Answer: What R/Bioconductor tools would you recommend for the analysis of sncRNA, specif
Using edgeR or DESeq2 to analyze allele-specific expression?
Answer: DESeq2 design for haplotype MPRA
Answer: Failure to download resources (MeSHDb) from AnnotationHub
Answer: Failure to download resources (MeSHDb) from AnnotationHub
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