Bioconductor Data

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482

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HELP Data

updated 15 months ago by Guido Hooiveld ★ 3.8k • written 15 months ago by mcclurejenniferc • 0

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383

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BAM Segmentation CINdex VCF Data

15 months ago raven1306 • 0

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1.6k

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ExpressionSet Assay NanoString Error Data

updated 16 months ago by James W. MacDonald 64k • written 16 months ago by junli1988 • 0

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442

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Cytometry R Data

17 months ago hamiltond ▴ 10

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745

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data immunology software vaccinology

2.2 years ago Daniel • 0

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959

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TCGAbiolinks data normalize l

updated 2.4 years ago by Kevin Blighe 3.9k • written 2.4 years ago by DANIELA • 0

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1.6k

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data package submission BiocCheck

4.4 years ago j.flesch ▴ 10

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840

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package data

5.3 years ago divyswar01 • 0

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632

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cellGrowth data

5.7 years ago muitalegal888 • 0

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1.1k

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omiccircos bug hg19 hg18 data

6.6 years ago matthew.bashton • 0

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1.0k

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transform flow cytometry data

updated 6.9 years ago by SamGG ▴ 320 • written 6.9 years ago by cr • 0

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1.1k

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rna-seq data

updated 7.0 years ago by Gordon Smyth 49k • written 7.0 years ago by bioinformatics ▴ 10

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1.3k

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edger data analysis

8.5 years ago Pau Marc Muñoz Torres ▴ 20

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1.1k

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data

8.5 years ago Bogdan ▴ 670

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2.8k

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biseq fdr data results

8.7 years ago • updated 8.6 years ago mnaymik ▴ 10

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1.9k

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flowCore flowjo data

updated 9.0 years ago by Greg Finak ▴ 150 • written 9.1 years ago by AJC ▴ 10

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2.9k

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limma export log2 data agilent

updated 9.2 years ago by James W. MacDonald 64k • written 9.2 years ago by Jahn Davik ▴ 110

17 results • Page 1 of 1

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Comment: Small RNA-seq Analysis DESEQ2 : Unexpected Significance by samer • 0

This is the result i got when i only looked on day 04 for the gene in example 1 posted above dds_sub <- dds[, dds$date %in% c("day04"…

Answer: What is the meaning of "CpG interrogation" and "single nucleotide extension(SBE) by James W. MacDonald 64k

There are two types of probes used by Illumina. The type I probes bind directly to the CpG site and have two different probes (one for a me…

Comment: Small RNA-seq Analysis DESEQ2 : Unexpected Significance by Michael Love 41k

Then for the remaining genes that you don't think are DE, just plot like this: ``` dds_sub <- dds[,dds$condition %in% c("x","y")] dropleve…

Comment: Small RNA-seq Analysis DESEQ2 : Unexpected Significance by samer • 0

yes i turned it off @mikelove

Answer: autonomics: example("read_somascan", package = "autonomics") fails, but not on B by Mike Smith ★ 6.2k

It looks like `autonomics` uses `BiocFileCache` to create a local copy of the data and save repeat downloading. Given the (relatively) rec…

Votes

Answer: What is the meaning of "CpG interrogation" and "single nucleotide extension(SBE)

Answer: WGCNA documentation not available

Comment: Can the limma package be applied to Log2 RUV-normalized data?

Answer: Correct the batch effect in methylation analysis in R

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Popular Question to Assa Yeroslaviz ★ 1.5k

Scholar to Gordon Smyth 49k

Popular Question to Lluís Revilla Sancho ▴ 720

Popular Question to Frederik Ziebell ▴ 20