Bioconductor DAVID

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DAVID

updated 4.5 years ago by shepherl 4.3k • written 4.5 years ago by deepue ▴ 10

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rdavidwebservice david

7.5 years ago rdalbanus • 0

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rdavidwebservice david

updated 7.6 years ago by gevermalc • 0 • written 10.6 years ago by Vivek.b ▴ 100

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microarray david differential gene expression GO

7.9 years ago seendey16 • 0

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pathway analysis over-representation analysis DAVID pantherDB consensuspathDB

9.2 years ago smt8n • 0

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RDAVIDWebService david

9.6 years ago umut.caglar ▴ 10

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software error david rdavidwebservice

updated 10.5 years ago by oops324 • 0 • written 10.9 years ago by TriS ▴ 200

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rdavidwebservice david differential gene expression annotation

updated 11.1 years ago by Dan Tenenbaum ★ 8.2k • written 11.1 years ago by hpw9 • 0

8 results • Page 1 of 1

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Answer: Which preprocessing steps are needed before running limpa? by Gordon Smyth 53k

Please see the example limpa analyses given at <http://github.com/smythlab/limpa>, especially the kidney cancer case study. limpa does not…

Comment: Why does IDTaxa trainingSet for SILVA contain "_2" suffixes in the taxonomy name by Korneel • 0

Thanks for the quick reply! If I understand correctly, I think if I keep track of the full lineage, I shouldn't have any risk of collapsin…

Comment: Pathway abundance data from Curatedmetagenomics by yesquokkan • 0

Hello, I was also wondering about the same issue. Did you figure it out?

Comment: [DESeq2] Changing dispersion estimates between runs of DESeq2 by colinmccornack • 0

FWIW: This seems to be due to architectural differences between two compute nodes I was running on, specifically with the DESeq2:::fitNbino…

Comment: Why does IDTaxa trainingSet for SILVA contain "_2" suffixes in the taxonomy name by Erik Wright ▴ 160

This has to do with the fact that some taxonomies reuse names at the same rank level. Common examples in the SILVA taxonomy are "Incertae S…

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Answer: Subsetting data verses contrasts [DESeq2]?

A: WGCNA differences two groups 10 replicates each group

A: WGCNA sample size minimum: why?

Comment: Why does IDTaxa trainingSet for SILVA contain "_2" suffixes in the taxonomy name

Answer: Can you colour dendrogram branch clusters in pheatmap?

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Popular Question to Peter Hickey ▴ 760