Bioconductor Rdavidwebservice

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Bioconductor RDAVIDWebService

updated 3.9 years ago by arta.seyedian ▴ 10 • written 3.9 years ago by Didi ▴ 10

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911

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RDAVIDWebService Gene Ontology GOTerm biomaRt

4.2 years ago ra711 • 0

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987

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rdavidwebservice david

6.2 years ago rdalbanus • 0

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17k

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rdavidwebservice david

updated 6.2 years ago by gevermalc • 0 • written 9.2 years ago by Vivek.b ▴ 100

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1.3k

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rdavidwebservice sgd_id

7.6 years ago johntoomey • 0

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2.5k

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deseq2 RDAVIDWebService

updated 8.0 years ago by Michael Love 42k • written 8.0 years ago by snamjoshi87 ▴ 40

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1.2k

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RDAVIDWebService

8.2 years ago camult • 0

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1.1k

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RDAVIDWebService david

8.3 years ago umut.caglar ▴ 10

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1.2k

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rJAVA java proxy connectiontimeout rdavidwebservice

8.5 years ago Julien FOURET • 0

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5.0k

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RDAVIDWebService

9.1 years ago alon.goren • 0

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11k

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software error david rdavidwebservice

updated 9.2 years ago by oops324 • 0 • written 9.6 years ago by TriS ▴ 200

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3.4k

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functional annotation KEGG RDavidWebService

9.4 years ago • updated 9.3 years ago alakatos ▴ 130

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1.6k

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rdavidwebservice

9.5 years ago Aditya ▴ 160

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2.9k

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rdavidwebservice

updated 9.6 years ago by James W. MacDonald 67k • written 9.6 years ago by chang02_23 ▴ 30

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1.9k

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rdavidwebservice david differential gene expression annotation

updated 9.7 years ago by Dan Tenenbaum ★ 8.2k • written 9.7 years ago by hpw9 • 0

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1.8k

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Pathways Homo sapiens RDAVIDWebService Pathways Homo sapiens RDAVIDWebService

updated 10.7 years ago by Cristobal Fresno Rodríguez ▴ 370 • written 10.7 years ago by Fazulur Rehaman ▴ 50

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2.2k

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RDAVIDWebService RDAVIDWebService

10.9 years ago Fazulur Rehaman ▴ 50

17 results • Page 1 of 1

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Answer: Need help interpreting heatmaps from limma by James W. MacDonald 67k

Heatmaps don't do any comparisons. They just plot the underlying data in a matrix and color the blocks based (in your case) on the by-gene …

Comment: Are transformed values from rlog /vst log2 normalized counts? by Eva ▴ 10

I understood exactly what you said, but I got confused with the documentation and the info that gives about rlog because it seems to be tha…

Answer: featureCounts fails to load annotation file by James W. MacDonald 67k

I imagine Wei Shi will be along later with actual help, but for now do note that you can use an SAF file instead of a GTF. It's easy enough…

Comment: Error for AnnotationForge makeOrgPackageFromNCBI function by James W. MacDonald 67k

That error indicates that you have a file called NCBI.sqlite in your working directory that is missing some tables. You should delete that …

Comment: Are transformed values from rlog /vst log2 normalized counts? by James W. MacDonald 67k

The `DESeq2` package is meant to analyze count data! Most packages that are intended to be used for RNA-Seq data are going to want the raw …

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Answer: Are transformed values from rlog /vst log2 normalized counts?

Comment: Are transformed values from rlog /vst log2 normalized counts?

Answer: Unable to install any Bioconductor package with new R 4.4.1 - path nor writable

Removing Effect of Covariate in Only a Subset of Samples in a Model Containing All Samples Loses Full Rank if Factor but not Numerical

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Scholar to James W. MacDonald 67k