Biostar Rdavidwebservice

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Bioconductor RDAVIDWebService

updated 21 months ago by arta.seyedian ▴ 10 • written 21 months ago by Didi ▴ 10

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368

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RDAVIDWebService Gene Ontology GOTerm biomaRt

2.1 years ago ra711 • 0

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537

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rdavidwebservice david

4.0 years ago rdalbanus • 0

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rdavidwebservice david

updated 4.1 years ago by gevermalc • 0 • written 7.1 years ago by Vivek.b ▴ 100

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907

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rdavidwebservice sgd_id

5.4 years ago johntoomey • 0

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deseq2 RDAVIDWebService

updated 5.8 years ago by Michael Love 37k • written 5.8 years ago by snamjoshi87 ▴ 40

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886

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RDAVIDWebService

6.1 years ago camult • 0

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719

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RDAVIDWebService david

6.1 years ago umut.caglar ▴ 10

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766

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rJAVA java proxy connectiontimeout rdavidwebservice

6.3 years ago Julien FOURET • 0

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4.2k

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RDAVIDWebService

6.9 years ago alon.goren • 0

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8.9k

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software error david rdavidwebservice

updated 7.0 years ago by oops324 • 0 • written 7.4 years ago by TriS ▴ 200

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2.2k

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functional annotation KEGG RDavidWebService

7.2 years ago alakatos ▴ 120

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rdavidwebservice

7.3 years ago Aditya ▴ 140

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2.3k

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rdavidwebservice

updated 7.4 years ago by James W. MacDonald 60k • written 7.4 years ago by chang02_23 ▴ 20

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1.3k

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rdavidwebservice david differential gene expression annotation

updated 7.5 years ago by Dan Tenenbaum ★ 8.2k • written 7.5 years ago by hpw9 • 0

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1.2k

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Pathways Homo sapiens RDAVIDWebService Pathways Homo sapiens RDAVIDWebService

updated 8.5 years ago by Cristobal Fresno Rodríguez ▴ 370 • written 8.5 years ago by Fazulur Rehaman ▴ 50

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1.6k

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RDAVIDWebService RDAVIDWebService

8.8 years ago Fazulur Rehaman ▴ 50

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Comment: TPM normalization starting with read counts by ATpoint ★ 1.4k

Neither edgeR nor DESeq2 output TPM directly. TPM is easy to calculate though if counts and appropriate length info is available (https://s…

Comment: error running UniProt.ws by davi.vuko • 0

I still get the same result as above, should running BiocManager::install() do the trick?

Answer: Adding custom transcript to Salmon index by ATpoint ★ 1.4k

Yes, you would add the sequence to the reference transcriptome that is used for the gentrome construction. Simply make a separate fasta fil…

Comment: IsoformSwitchAnalyzeR package on mouse data by bpshtiwan ▴ 10

Hello Ryan, Also, I am not able to find esemble file that has haplotype info in it. Kindly, have you solved the problem? Best

Comment: Design and contrast matrices for analyzing the effect of two factors of interest by Gordon Smyth 46k

I understand that your mock dataset has expression data for just one protein instead of 8000, but is the phenoData complete? Does your real…

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A: Importance of Order in Design Formula

remove microarray batch effects using Limma

On empirical Bayes of edgeR

Answer: CQN to DESeq2

Comment: package 'BiocInstaller' is not available (for R version 3.4.4)

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