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DBA
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0
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911
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DBA Error in DiffBind - How to format sampleSheet
DBA
R
DifferentialPeakCalling
3.1 years ago
opheevallee
• 0
0
votes
1
reply
1.6k
views
DiffBind dba error
DiffBind
dba
R
error
updated 5.4 years ago by
Rory Stark
★ 5.2k • written 5.6 years ago by
annika-helverson
• 0
3
votes
3
replies
4.7k
views
Error "if (is.na(peaks)) { : argument is of length zero " in DiffBind
diffbind
chipseq
peaks
dba
is.na
6.8 years ago
maria.kondili
▴ 10
0
votes
0
replies
1.3k
views
How to call "DBA_CONDITION" for mutiple conditions and How to control GLM program
cancer
deseq2
edger
CONDITIONS
DBA
7.0 years ago
arcucamila
• 0
3
votes
7
replies
2.3k
views
dba.count with pre-defined regions
dba.count
dba
chipseq
diffbind
updated 7.1 years ago by
Rory Stark
★ 5.2k • written 7.1 years ago by
sylvia
▴ 10
0
votes
1
reply
1.5k
views
can't find function "dba" in DiffBind
DiffBind
dba
package installation
8.2 years ago
rebecca.spokony
• 0
1
vote
16
replies
4.3k
views
Error: could not find function "dba"
software error
diffbind
dba
8.2 years ago
mmarins
• 0
7 results • Page
1 of 1
Recent ...
Replies
Comment: How to sort negative log2FC or FC in RNAseq for GSEA?
by
Quang NN
▴ 10
Thank you so much for taking time to provide this clarification!
Comment: How can I generate a heatmap and clustering of differentially expressed genes in
by
Renuka
• 0
Thanks Kelvin i had same doubt .Do i need to do log2 (FPKMcounts) for this
Comment: Is there a way to do DEG analysis across two batches sharing one sample only?
by
georgeyu703
• 0
Michael, Thank you very much!
Comment: Is there a way to do DEG analysis across two batches sharing one sample only?
by
Michael Love
43k
Yes, with the knowledge that, it is expected to be underpowered.
Comment: Is there a way to do DEG analysis across two batches sharing one sample only?
by
georgeyu703
• 0
Thank you, Michael. How? Could you provide more details? Can I just do it as usual, I mean to include batch in the model?
Votes
Answer: SingleCellExperiment convenience function for metadata+expression?
How to correct for tumor purity using DESeq2 to analyze TCGA tumor sample expression.
Answer: EdgeR Biological CVs
Answer: Error in download.file for TCGAutils::symbolsToRanges
Answer: Error in download.file for TCGAutils::symbolsToRanges
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