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dba
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DBA Error in DiffBind - How to format sampleSheet
DBA
R
DifferentialPeakCalling
3.4 years ago
opheevallee
• 0
0
votes
1
reply
1.7k
views
DiffBind dba error
DiffBind
dba
R
error
updated 5.7 years ago by
Rory Stark
★ 5.2k • written 5.9 years ago by
annika-helverson
• 0
3
votes
3
replies
4.9k
views
Error "if (is.na(peaks)) { : argument is of length zero " in DiffBind
diffbind
chipseq
peaks
dba
is.na
7.0 years ago
maria.kondili
▴ 10
0
votes
0
replies
1.3k
views
How to call "DBA_CONDITION" for mutiple conditions and How to control GLM program
cancer
deseq2
edger
CONDITIONS
DBA
7.2 years ago
arcucamila
• 0
3
votes
7
replies
2.4k
views
dba.count with pre-defined regions
dba.count
dba
chipseq
diffbind
updated 7.4 years ago by
Rory Stark
★ 5.2k • written 7.4 years ago by
sylvia
▴ 10
0
votes
1
reply
1.5k
views
can't find function "dba" in DiffBind
DiffBind
dba
package installation
8.4 years ago
rebecca.spokony
• 0
1
vote
16
replies
4.5k
views
Error: could not find function "dba"
software error
diffbind
dba
8.5 years ago • updated 8.4 years ago
mmarins
• 0
7 results • Page
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Comment: DeSeq Strategies for run to run Replication
by
Michael Love
43k
You shouldn't need to run `DESeq` on the test data, or manually compute normalization factors. ``` dds_test <- ... # create object dds_te…
Answer: Feature Counts - potential bug with outfile.jcounts
by
Wei Shi
★ 3.6k
We have made significant changes to how featureCounts annotates junctions detected in read mapping results. These updates are included in t…
Comment: How to perform batch correction on scRNA-seq with confounding plate effects?
by
瑞宏
• 0
I would like to share my own understanding: in single-cell RNA sequencing (scRNA-seq), batch correction is solely intended to identify the …
Comment: DiffBind can't find a DAR
by
Mengjun
• 0
Additionally, i checked my bigwig in igv, it shows that the ctrl_1 is more like ko_1, and ctrl_2's track is more like ko_2's track. Did an…
Comment: European Bioconductor Conference 2023 planning
by
ht
• 0
Great news about the European Bioconductor Conference 2023 planning! As someone who enjoys statistical computing and bioinformatics, I'm ex…
Votes
Comment: Differential expression analysis using two TCGA datasets
C: Annotating HTA 2.0 genes
C: Annotating HTA 2.0 genes
A: Annotating HTA 2.0 genes
A: Annotating HTA 2.0 genes
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