Bioconductor DistanceToNearest

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rtracklayer ranges distanceToNearest

2.0 years ago robjohn70000 • 0

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1.2k

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GenomicRanges GenomicFeatures grange distanceToNearest R

6.2 years ago rmash ▴ 20

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1.6k

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GenomicRanges distancetonearest strandedness

updated 7.8 years ago by Valerie Obenchain ★ 6.8k • written 7.8 years ago by shraddha.pai • 0

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GRanges distancetonearest

updated 8.1 years ago by Julie Zhu ★ 4.3k • written 8.1 years ago by chitsazanalex ▴ 10

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chipenrich granges distancetonearest function dataframe

8.2 years ago rbronste ▴ 60

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genomicranges DistanceToNearest

updated 9.4 years ago by Valerie Obenchain ★ 6.8k • written 9.4 years ago by roladali ▴ 20

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Comment: BiocParallel (and DESeq2) - wrong args for environment subassignment by Martin Morgan 25k

I see rstudioapi in the `sessionInfo()`. RStudio does not support forked ('multicore') processes. Does the BiocParallel example work when y…

Comment: BiocParallel (and DESeq2) - wrong args for environment subassignment by Michael Love 43k

Given that this is an issue with BiocParallel on your machine and we have a minimal reproducible example, you may want to repost the issue.…

Comment: BiocParallel (and DESeq2) - wrong args for environment subassignment by ATpoint ★ 5.0k

Yes, still it's not reproducible, yet hard to debug. I cannot reproduce myself either.

Comment: BiocParallel (and DESeq2) - wrong args for environment subassignment by Benjamin • 0

Still happening using pre-existing size factors estimating dispersions gene-wise dispersion estimates: 15 workers mean-dis…

Answer: BiocParallel (and DESeq2) - wrong args for environment subassignment by Benjamin • 0

Still happening in a clean install

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A: Filtering read counts matrix: how to deal with duplicated gene symbols, differen

Comment: limpa analysis advice

Answer: When to use edgeR or limma

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