Bioconductor DistanceToNearest

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rtracklayer ranges distanceToNearest

22 months ago robjohn70000 • 0

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GenomicRanges GenomicFeatures grange distanceToNearest R

6.1 years ago rmash ▴ 20

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GenomicRanges distancetonearest strandedness

updated 7.6 years ago by Valerie Obenchain ★ 6.8k • written 7.6 years ago by shraddha.pai • 0

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GRanges distancetonearest

updated 8.0 years ago by Julie Zhu ★ 4.3k • written 8.0 years ago by chitsazanalex ▴ 10

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chipenrich granges distancetonearest function dataframe

8.1 years ago • updated 8.0 years ago rbronste ▴ 60

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genomicranges DistanceToNearest

updated 9.2 years ago by Valerie Obenchain ★ 6.8k • written 9.2 years ago by roladali ▴ 20

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Comment: upstream git branches of bioc-release by TrentonCollier99 • 0

Thank you very much for taking the time to answer the question. I really appreciate your insights and comments. https://bioc-release.r-univ…

Comment: Highly similar RNA-seq samples in PCA - pooling or technical duplication? by Ahmed Salah • 0

Thank you very much! will take that into consideration

Comment: Large logFC but somewhat high FDR by JKim • 0

Thank you very much for taking the time to answer the question. I really appreciate your insights and comments.

Comment: upstream git branches of bioc-release by Jeroen ▴ 10

OK I have updated https://bioc-release.r-universe.dev accordingly. Let me know if you find version differences when mirroring binaries.

Comment: Large logFC but somewhat high FDR by Gordon Smyth 53k

I don't know what `tp1` is. The relevant histogram would be: ``` hist(fit2$p.value[,"KO_vs_WT"]) ```

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Comment: Highly similar RNA-seq samples in PCA - pooling or technical duplication?

Answer: Large logFC but somewhat high FDR

Comment: upstream git branches of bioc-release

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