Bioconductor DistanceToNearest

Showing : DistanceToNearest • reset

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rtracklayer ranges distanceToNearest

2.2 years ago robjohn70000 • 0

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GenomicRanges GenomicFeatures grange distanceToNearest R

6.3 years ago rmash ▴ 20

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1.6k

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GenomicRanges distancetonearest strandedness

updated 7.9 years ago by Valerie Obenchain ★ 6.8k • written 7.9 years ago by shraddha.pai • 0

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GRanges distancetonearest

updated 8.2 years ago by Julie Zhu ★ 4.3k • written 8.2 years ago by chitsazanalex ▴ 10

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chipenrich granges distancetonearest function dataframe

8.3 years ago rbronste ▴ 60

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genomicranges DistanceToNearest

updated 9.5 years ago by Valerie Obenchain ★ 6.8k • written 9.5 years ago by roladali ▴ 20

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Answer: recursively counting package dependencies by ATpoint ★ 5.0k

Based on https://stat.ethz.ch/pipermail/bioc-devel/2021-October/018596.html it is something like ```r db <- available.packages(repos = …

Comment: Inclusion of non-coding portions of transcripts (UTR-regions and introns) within by Pat • 0

Ill be honest, I didnt trust any of these services for a long time. Im a political science major and the pressure around writing is intense…

Comment: Question on processing compound protein groups in limpa by brianpeterson1210 • 0

Thank you[,][1] Appreciated! [1]: http://paint3d.org

Comment: Subsetting DDS object for individual conditions over time by A ▴ 60

Hi @atpoint Thank you for the quick reply! and this makes sense! I will confirm with a corr to see how the SFs differ but also how DE dif…

Answer: Subsetting DDS object for individual conditions over time by ATpoint ★ 5.0k

It would surprise my quite a bit if the size factors would differ notably between subset or not. I would always try to keep the size factor…

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Comment: Question about using LRT test for time course experiments with DESeq2

A: DESeq2 LRT test for multi-factor designs

Answer: RNA Seq using Lrt

Answer: DESeq2 LRT Reduced Formula

Answer: DESeq2: LRT or WALD guidance

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Teacher to ATpoint ★ 5.0k

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