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grange
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Error in Medips MEDIPS.CpGenrich()
software error
Grange
RangedData
6.0 years ago
mawusse.agbessi
• 0
2
votes
0
replies
1.2k
views
SOLVED. finding distance to nearest neighbour (non-self) within a list in GenomicRanges
GenomicRanges
GenomicFeatures
grange
distanceToNearest
R
6.3 years ago
rmash
▴ 20
0
votes
1
reply
953
views
Multi-sample Heatmap from GRange
GRange
updated 7.2 years ago by
James W. MacDonald
68k • written 7.2 years ago by
Danny
• 0
0
votes
3
replies
3.5k
views
Selecting columns form a list of grange objects
r
granges
grange
7.4 years ago
g.k
• 0
1
vote
3
replies
1.5k
views
GRange and bam files
bioconductor
Grange
7.8 years ago
Merlin
▴ 10
0
votes
1
reply
1.3k
views
Detect Sites with Minimum Gap in GRanges Object
R
genomicranges
granges
grange
7.9 years ago
g.k
• 0
1
vote
2
replies
2.4k
views
Detecting Overlaps within Grange Object
r
grange
granges
iranges
updated 7.9 years ago by
Michael Lawrence
★ 11k • written 7.9 years ago by
g.k
• 0
3
votes
4
replies
6.4k
views
GenomicRanges: Take union of GRanges and keep metadata?
GRange
genomicranges
updated 9.4 years ago by
Martin Morgan
25k • written 9.4 years ago by
endrebak85
▴ 40
1
vote
2
replies
3.0k
views
Extract GRanges for gene data frame
GRange
updated 9.5 years ago by
Martin Morgan
25k • written 9.5 years ago by
mdeea123
▴ 10
9
votes
21
replies
14k
views
annotate GRanges with upstream or downstream nearest gene
GRange
genomicranges
genomicfeatures
updated 10.1 years ago by
Ou, Jianhong
★ 1.4k • written 10.1 years ago by
tangming2005
▴ 200
0
votes
1
reply
1.4k
views
summarizeOverlaps on partial BAM file?
GenomicFeatures
GRange
Rsamtools
updated 11.1 years ago by
Valerie Obenchain
★ 6.8k • written 11.1 years ago by
cidster12
• 0
4
votes
2
replies
1.6k
views
about INCLUSIVE INTERSECTION of GRANGES
Grange
11.2 years ago
Bogdan
▴ 670
12 results • Page
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Comment: Question on processing compound protein groups in limpa
by
JKim
• 0
Many thanks. I appreciate your advice.
Answer: Question on processing compound protein groups in limpa
by
Gordon Smyth
53k
Different people have different ways of dealing with compound protein groups. You could just leave them in the analysis, in which case limp…
Answer: Correct usage of limpa for protein input
by
Gordon Smyth
53k
limpa can work on protein-level quantifications, but they must be intensity-based and must be on the log scale. From what I read (<https://…
Comment: A problem occurs when running the monocle2
by
a2a2hset32aa
• 0
Troubleshooting monocle2 errors in R 4.5.1 often points to package incompatibilities, particularly with newer versions of igraph. For resea…
Comment: Deadline Extended: EuroBioC2026 Call for Abstracts
by
a2a2hset32aa
• 0
Attending EuroBioC2026 is an excellent way for researchers to explore the intersection of technology and biology. For those seeking high qu…
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Answer: Question on processing compound protein groups in limpa
Answer: Correct usage of limpa for protein input
Answer: Correct usage of limpa for protein input
Answer: Correct usage of limpa for protein input
A: Interpretaion of dendrogram height in WGCNA?
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