Bioconductor EnsDb.Hsapiens.v86

Showing : EnsDb.Hsapiens.v86 • reset

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EnsDb.Hsapiens.v86 EnsDb.Hsapiens.v79 EnsDb.Hsapiens.v75

15 months ago Taeim • 0

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installation EnsDb.Hsapiens.v86 Bioconductor package ensembldb

17 months ago elmfinds • 0

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EnsDb.Hsapiens.v86 gene

20 months ago beslinail • 0

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ens ensembldb EnsDb.Hsapiens.v86 EnsDb.Rnorvegicus.v75

2.5 years ago Ahdee ▴ 50

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salmon EnsDb.Hsapiens.v86 tximport

updated 2.8 years ago by James W. MacDonald 64k • written 2.8 years ago by TJ • 0

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tximport ensembldb EnsDB.hsapiens.v86

updated 4.9 years ago by Bioconductor Community 0 • written 5.0 years ago by michaelschoeber ▴ 20

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Comment: Problem making orgdb package for bacteria (Pseudomonas) using annotation hub and by Aastha Kapoor • 0

After several attempts the code has worked. I connected to a faster internet connection. set the timeout (1000000) and run the command. I …

Comment: DESeq2 estimateSizeFactors iterate takes too long by Karthik • 0

Hello, I agree with you, and we are in process of working with collaborators, but I wanted to get a general opinion on the data and get a …

Comment: It's possible to use clusterProfiler without an annotationDBI package by Guido Hooiveld ★ 3.8k

Code to show it works: > library(clusterProfiler) > > ## use provided 10 IDs, plus as last one add ID that has a GO annotati…

Comment: It's possible to use clusterProfiler without an annotationDBI package by Guido Hooiveld ★ 3.8k

You are almost there... Yet - pay attention to the error message (`--> No gene can be mapped.... --> Expected input gene ID: GO:0055080, .…

Comment: Problem loading HDF5Array in R 4.3.2 by Sarah • 0

Thanks for the reply! I tried this and it is crashing at `h5createFile("test.h5")` even after reinstalling **Rhdf5lib** and **rhdf5** It …

Votes

Answer: Limma/DESeq2 for unbalanced nested design (paired samples)

Result from GSEA for non-model organism not as expected

Comment: DESeq2 estimateSizeFactors iterate takes too long

Answer: DESeq2 estimateSizeFactors iterate takes too long

Comment: biomaRtl returns multiple GO terms when filtering on a single GO term in ensembl

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Scholar to Mike Smith ★ 6.2k

Scholar to Hervé Pagès 16k