Bioconductor Exon

Showing : Exon • reset

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1.8k

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rnaseq exon quasr

updated 9.4 years ago by Steve Lianoglou ★ 13k • written 9.4 years ago by sven.schuierer • 0

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2.8k

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rsubread featurecounts exon mRNAseq

updated 6.9 years ago by Wei Shi ★ 3.6k • written 6.9 years ago by inah ▴ 10

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1.4k

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Annotatr CDS Exon UTR

updated 6.2 years ago by rcavalca ▴ 140 • written 6.2 years ago by xie186 • 0

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1.3k

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DEXSeq exon memory dispersions estimateDispersions

4.0 years ago andreismolnikov00 • 0

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653

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DEXSeq exon

updated 2.1 years ago by Alejandro Reyes ★ 1.9k • written 2.1 years ago by jochen • 0

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841

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splicing Exon featureCounts subread DEXSeq

23 months ago NIK • 0

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387

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exon AnnotationHubData

12 months ago mahima.g • 0

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861

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DEXSeq exon_definition exon

updated 10 months ago by Alejandro Reyes ★ 1.9k • written 10 months ago by zhangpeng1202 • 0

8 results • Page 1 of 1

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Comment: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it by Hervé Pagès 16k

Indeed. Calculations involving floating point arithmetic are architecture-dependent, and testing the results should be done with `all.equal…

Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package) by Poonam • 0

I will follow what you suggested. I didn't use max gap anywhere. I was following statistic I and regarding the size of features, my small…

Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package) by Michael Love 41k

Oh I see, for the second question, I don't have a great answer. I typically think of one set as the anchor, whose ascertainment is driving …

Comment: Help with running egsea() by James W. MacDonald 65k

Oh, right. Ideally you would use NCBI (aka Entrez gene) IDs because they are way more likely to be unique. Gene symbols are broken down int…

Comment: Help with running egsea() by Chris • 0

Thanks James! I update the question. The last question mean when we use `buildIdx()`, could we use gene symbol instead of entrezID. However…

Votes

Answer: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it

Comment: Help with running egsea()

Answer: Trim/Filter out-of-bounds GRanges

Comment: Help with running egsea()

Answer: How to save the DEXSeq results

Awards • All

Scholar to Michael Love 41k

Popular Question to Malcolm Cook ★ 1.6k

Teacher to Gordon Smyth 50k