Bioconductor CDS

Showing : CDS • reset

votes

replies

2.4k

views

txdb granges cds orf R

updated 7.7 years ago by James W. MacDonald 68k • written 7.7 years ago by q.thomas • 0

votes

2.1k

views

genomeintervals UTRs exons CDS GenomicRanges

updated 8.5 years ago by Michael Lawrence ★ 11k • written 8.5 years ago by rubi ▴ 110

votes

2.5k

views

biomart bioconductor grangeslist cds ribosome profiling

updated 8.7 years ago by Hervé Pagès 16k • written 8.7 years ago by Walter F. Baumann ▴ 10

votes

replies

3.5k

views

genomicfeatures txdb.hsapiens.ucsc.hg19.knowngene cds

9.4 years ago madsheilskov ▴ 10

votes

replies

2.4k

views

cds

10.2 years ago KB ▴ 50

votes

replies

3.2k

views

genomicfeatures genomicranges cds overlap

updated 10.2 years ago by Michael Lawrence ★ 11k • written 10.2 years ago by madsheilskov ▴ 10

votes

1.9k

views

genomicfeatures genomicranges cds overlap

updated 4.2 years ago by balajee • 0 • written 10.2 years ago by madsheilskov ▴ 10

7 results • Page 1 of 1

Recent ...

Replies

Comment: [DESeq2] Changing dispersion estimates between runs of DESeq2 by colinmccornack • 0

FWIW: This seems to be due to architectural differences between two compute nodes I was running on, specifically with the DESeq2:::fitNbino…

Comment: Why does IDTaxa trainingSet for SILVA contain "_2" suffixes in the taxonomy name by Erik Wright ▴ 150

This has to do with the fact that some taxonomies reuse names at the same rank level. Common examples in the SILVA taxonomy are "Incertae S…

Comment: Deseq2 DE analysis of host-pathogen samples (model separately or jointly?) by a2a2ddrhaa • 0

For those taking a break from the lab, the CT777 Game download https://ct7777.pk/ offers a high-performance entry into online mobile gaming…

Answer: Subsetting data verses contrasts [DESeq2]? by ATpoint ★ 5.0k

This has been asked many times before, please search for relevant posts. In short: Generally it is least tedious to not split the data and …

Comment: Bulk RNAseq analysis for by Mariami • 0

Thank you so much for your help! will try to proceed with the suggestion

Votes

Answer: Can you colour dendrogram branch clusters in pheatmap?

Comment: Are transformed values from rlog /vst log2 normalized counts?

Are transformed values from rlog /vst log2 normalized counts?

Answer: Bulk RNAseq analysis for

Answer: DiffBind differential analysis

Awards • All

Popular Question to Peter Hickey ▴ 760