Showing : GAGE package • reset
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GAGE for non model organism
gage package gage
5.2 years ago melkile26 • 0
1
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2
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938
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GAGE analysis with the whole or a subset of matrix
gage gage package gene expression matrix gene set analysis
5.2 years ago atakanekiz ▴ 30
5
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7
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2.4k
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Gage package; go.gset() function error: argument "go_id" is missing
gage package error
updated 5.4 years ago by 63k • written 5.4 years ago by ▴ 20
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2
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3.3k
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Cannot open URL 'http://rest.kegg.jp/get/osaNA/kgml': HTTP status was '400 Bad Request'
gage gage package pathview rna-seq
updated 18 months ago by • 0 • written 5.6 years ago by • 0
2
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4
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1.3k
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Can't find gene list for KEGG genesets
kegg geneset genelist gage package
updated 6.1 years ago by 48k • written 6.1 years ago by ▴ 30
1
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0
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1.3k
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DESeq2 - GAGE workflow
gage package deseq2
6.1 years ago sup230 ▴ 30
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2
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1.3k
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How to extract essential genes from pathway (essGene) using DEseq2/GAGE workflow?
gage gage package
updated 6.9 years ago by ★ 1.6k • written 6.9 years ago by • 0
1
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2
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1.2k
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Need to convert gene IDs for GAGE pathway analysis of honey bee RNA-seq data
R gage package rnaseq pathview
7.1 years ago joanito.liberti • 0
0
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1
reply
811
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Question on Gage
gage package path.ids RNA-Seq
7.1 years ago rl1385 • 0
0
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0
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795
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GAGE package statistical tests
t-test GAGE package Kolmogorov-Smirnov test Gene-Set enrichment
7.2 years ago smt8n • 0
10 results • Page 1 of 1
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Comment: Speeding up of DelayedArray::write_block() by Koki ▴ 10
Thank you, I have a very clear understanding of the situation. > COO_Sparse_HDF5RealizationSink(), writeHDF5SparseArray(), COO_H5SparseArr…
Comment: Speeding up of DelayedArray::write_block() by Koki ▴ 10
There are a few places inside my `DelayedTensor` package that use `SparseArraySeed`. Will these stop working in next coming BioC 3.18, whe…
Comment: DelayedArray::read_sparse_block by Hervé Pagès 16k
No. But I will need to modify the `write_block()` method for TENxRealizationSink implemented in **HDF5Array** to make it handle blocks that…
Answer: ''Model_Matrix'' error by Gordon Smyth 48k
This is actually an error message from base R rather than from limma. The error says that `Group` contains 0 or 1 levels, so your assumptio…
Comment: Speeding up of DelayedArray::write_block() by Hervé Pagès 16k
> I don't know the details but do you mean using HDF5RealizationSink or TENxRealizationSink will make it possible to writing sparse multi-d…
Votes
Steps needed to change design (relevel factors) in DESeq2
Steps needed to change design (relevel factors) in DESeq2
Answer: DMRcate design
Answer: DMRcate design
Comment: DMRcate design
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Popular Question to Koki ▴ 10
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Popular Question to sohail.mbio ▴ 10
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