Showing : GO • reset
0
votes
2
replies
2.0k
views
Help with loading newly created custom annotation db into R session
Annotation GO GUI zebrafish probe Annotation GO GUI zebrafish probe
updated 16.9 years ago by 68k • written 16.9 years ago by ▴ 300
0
votes
0
replies
831
views
Bioc-devel Digest, Vol 57, Issue 4
Annotation Normalization GO affy PROcess Annotation Normalization GO affy PROcess
16.9 years ago rcaloger ▴ 500
0
votes
2
replies
1.2k
views
Illumina annotation problem - illuminaHumanv2GENENAME
GO illuminaHumanv2 GO illuminaHumanv2
updated 16.9 years ago by ▴ 280 • written 16.9 years ago by ▴ 20
0
votes
4
replies
1.5k
views
Multiple test question in micrarray- FDR
GO Preprocessing GO Preprocessing
updated 17.0 years ago by ▴ 220 • written 17.0 years ago by ★ 6.0k
0
votes
3
replies
3.1k
views
using biomaRt to find all genes with kinase activity (and perhaps a Gene Ontology question too)
GO GO
updated 17.0 years ago by 68k • written 17.0 years ago by ▴ 350
0
votes
0
replies
1.6k
views
sd==0 for some probesets when using gcrma
Microarray Proteomics Epigenetics Normalization GO Cancer hgu95av2 affy graph gcrma GO
17.0 years ago Dick Beyer ★ 1.4k
0
votes
9
replies
2.2k
views
specifications for exonmap database config file?
GO exonmap GO exonmap
updated 17.0 years ago by ★ 2.0k • written 17.0 years ago by ▴ 70
0
votes
0
replies
847
views
limma design question
GO limma GO limma
17.0 years ago Jenny Drnevich ★ 2.0k
0
votes
0
replies
1.0k
views
biomaRt with multiple databases/datasets?
Pathways GO biomaRt Pathways GO biomaRt
17.0 years ago T Joshi ▴ 90
0
votes
2
replies
2.3k
views
error with getBM function of biomaRt package
GO GO
updated 17.0 years ago by 68k • written 17.0 years ago by ▴ 90
0
votes
3
replies
1.1k
views
cDNA raw intensities
Microarray Annotation GO limma Microarray Annotation GO limma
updated 17.0 years ago by ★ 6.0k • written 17.0 years ago by ▴ 80
0
votes
0
replies
1.0k
views
tilingArray problems
Normalization GO tilingArray Normalization GO tilingArray
17.0 years ago Wolfgang Huber ★ 13k
0
votes
2
replies
2.0k
views
Custom CDF files
Annotation GO cdf affy PROcess oligo pdInfoBuilder Annotation GO cdf affy PROcess
updated 17.0 years ago by ★ 1.1k • written 17.0 years ago by ▴ 20
0
votes
0
replies
858
views
Custom CDF files
Annotation GO cdf affy PROcess Annotation GO cdf affy PROcess
17.0 years ago Edward Oakeley ▴ 20
0
votes
3
replies
1.7k
views
Genes and their associated GO terms and pathways
GO GO
updated 17.0 years ago by ★ 13k • written 17.0 years ago by ▴ 190
0
votes
1
reply
1.8k
views
GSEABase
GO illuminaHumanv2 lumi GSEABase GO illuminaHumanv2 lumi GSEABase
updated 17.0 years ago by 25k • written 17.0 years ago by ▴ 280
0
votes
2
replies
1.7k
views
confused about J-G statistic of GSEAlm
GO GSEAlm GO GSEAlm
updated 17.0 years ago by ★ 5.5k • written 17.0 years ago by ▴ 830
0
votes
1
reply
2.1k
views
Bug in topGO-package [topGO_1.10.0: GenTable-function]
GO hgu133plus2 siggenes GO hgu133plus2 siggenes
updated 17.0 years ago by ▴ 400 • written 17.0 years ago by ▴ 330
0
votes
1
reply
1.1k
views
clone id to chromosome position
GO BAC GO BAC
updated 17.0 years ago by 21k • written 17.0 years ago by ▴ 50
0
votes
0
replies
1.2k
views
error with get(getOption("device")) in maanova with R 2.8.0
GO maanova GO maanova
17.0 years ago Wolfgang Huber ★ 13k
0
votes
1
reply
1.7k
views
mget function - newbie question
GO GO
updated 17.0 years ago by ★ 2.0k • written 17.0 years ago by ★ 1.1k
0
votes
2
replies
1.6k
views
using GSEAlm with GO geneSetCollections
GO affy goTools Category GSEABase GSEAlm GO affy goTools Category GSEABase GSEAlm
updated 17.0 years ago by ▴ 90 • written 17.0 years ago by ▴ 830
0
votes
2
replies
2.0k
views
Agilent G4112F with hgug4112a.db?
GO hgug4112a GO hgug4112a
updated 17.0 years ago by ★ 1.3k • written 17.0 years ago by ▴ 190
0
votes
1
reply
1.2k
views
browseGenome width question (rtracklayer)
GO hgu95av2 GO hgu95av2
updated 17.0 years ago by ▴ 620 • written 17.0 years ago by ★ 1.1k
0
votes
5
replies
1.6k
views
annotation information about ecoli2
Annotation GO probe annaffy Annotation GO probe annaffy
updated 17.1 years ago by 68k • written 17.1 years ago by ▴ 10
0
votes
2
replies
1.1k
views
quantile normalization with common standards
GO oligo GO oligo
updated 17.1 years ago by ★ 13k • written 17.1 years ago by ▴ 150
0
votes
1
reply
733
views
MA.loess
GO convert GO convert
updated 17.1 years ago by ★ 13k • written 17.1 years ago by ▴ 40
0
votes
1
reply
735
views
converting MA to a text file
GO Clustering GO Clustering
updated 17.1 years ago by 21k • written 17.1 years ago by ▴ 40
0
votes
9
replies
1.9k
views
Help with 'annotation' in GOHyeprGParamsClass
Annotation GO Yeast Category Annotation GO Yeast Category
updated 17.1 years ago by ★ 5.5k • written 17.1 years ago by ▴ 50
0
votes
1
reply
1.2k
views
Reading ArrayExpress data [was Re: questions on the ImaGene data using limma package]
Annotation Normalization GO Cancer limma ArrayExpress Annotation Normalization GO Cancer
updated 17.1 years ago by ▴ 280 • written 17.1 years ago by 53k
0
votes
8
replies
2.3k
views
Annotation packages
Annotation GO hgu95av2 affy limma Annotation GO hgu95av2 affy limma
updated 17.1 years ago by 21k • written 17.1 years ago by ▴ 350
0
votes
3
replies
1.1k
views
probesets from a KEGGHyperGParams instance
GO GO
updated 17.1 years ago by 68k • written 17.1 years ago by ▴ 160
0
votes
1
reply
1.1k
views
how to get chrom positions(bp) of a fragment delimited by 2 cytobands
GO GO
updated 17.1 years ago by 21k • written 17.1 years ago by ▴ 50
0
votes
2
replies
1.8k
views
Error when trying to build a package that needs to import GO.db, GOstats, ath1121501.db packages
Annotation GO Cancer ath1121501 AnnotationDbi BHC Annotation GO Cancer ath1121501 BHC
updated 17.1 years ago by ▴ 60 • written 17.1 years ago by 25k
0
votes
0
replies
1.4k
views
Error when trying to build a package that needs to import GO.db, GOstats, ath1121501.db packages
Annotation GO ath1121501 BHC Annotation GO ath1121501 BHC
17.1 years ago Rich Savage ▴ 60
0
votes
5
replies
2.8k
views
GOstats: Listing genes from hyperGTest
Annotation GO probe affy Annotation GO probe affy
17.1 years ago Tim Smith ★ 1.1k
0
votes
1
reply
2.4k
views
Entrez Gene ID to Probe Set Name
aCGH Sequencing miRNA Microarray Annotation Normalization GO Preprocessing Visualization
updated 17.1 years ago by ★ 7.2k • written 17.1 years ago by ▴ 300
0
votes
3
replies
2.9k
views
How to create a GO2gene object for topGO?
GO topGO GO topGO
updated 17.1 years ago by ★ 3.4k • written 17.1 years ago by ▴ 100
2
votes
0
replies
1.7k
views
Problem using Rgraphviz (edge weights going missing).
GO graph Rgraphviz GO graph Rgraphviz
17.1 years ago Dan Bolser ▴ 40
0
votes
0
replies
1.5k
views
[Fwd: batch info for cellHTS]
GO Cancer cellHTS cellHTS2 GO Cancer cellHTS cellHTS2
17.1 years ago Florian Hahne ▴ 540
0
votes
1
reply
1.1k
views
GOstats and org.EcK12.eg.db
Annotation GO GOstats Annotation GO GOstats
updated 17.1 years ago by ★ 5.5k • written 17.1 years ago by ★ 3.4k
0
votes
3
replies
1.3k
views
GOstat: listing genes from hyperGTest
Annotation GO Annotation GO
17.1 years ago Tim Smith ★ 1.1k
0
votes
3
replies
1.7k
views
help with using Category package with makecdfenv built Gene ST package
GO cdf affy limma Category GO cdf affy limma Category
updated 17.1 years ago by ★ 5.5k • written 17.1 years ago by ▴ 830
0
votes
1
reply
1.7k
views
ACCNUM match zero using AnnotationDBI package
GO ChipName AnnBuilder AnnotationDbi GO ChipName AnnBuilder AnnotationDbi
updated 17.1 years ago by ★ 7.2k • written 17.1 years ago by ▴ 120
0
votes
2
replies
1.3k
views
hyperGTest
GO hgu133a hgu133plus2 hgu95av2 GO hgu133a hgu133plus2 hgu95av2
updated 17.1 years ago by ★ 5.5k • written 17.1 years ago by ★ 1.2k
0
votes
3
replies
1.3k
views
Missing function locuslinkQuery and locuslinkBYID in annotate 1.18.0
GO hgu95av2 Biobase annotate GO hgu95av2 Biobase annotate
updated 17.1 years ago by ★ 7.2k • written 17.1 years ago by ▴ 300
0
votes
0
replies
1.1k
views
Problem using 'biol_process' filter in biomaRt
GO biomaRt GO biomaRt
17.1 years ago J.J.P.Lebrec@lumc.nl ▴ 30
0
votes
0
replies
850
views
Samr error message doubt
GO GO
17.1 years ago Henrique Proença ▴ 80
0
votes
1
reply
1.0k
views
Missing function locuslinkQuery and locuslinkBYID in annotate 1.18.0
GO hgu95av2 Biobase annotate GO hgu95av2 Biobase annotate
updated 17.1 years ago by ★ 7.2k • written 17.1 years ago by ▴ 300
0
votes
4
replies
2.5k
views
topGO problem
GO cdf affy topGO GO cdf affy topGO
17.1 years ago Iain Gallagher ▴ 930
1,936 results • Page 25 of 39
Recent ...
Replies
Comment: featureCounts -L: high unassigned:mapq fraction by insurancetaaddddaxrealty • 0
FeatureCounts can behave differently with ONT cDNA BAM files due to long read splice patterns, and many users compare settings or presets m…
Comment: A problem occurs when running the monocle2 by e.j.aaw.g.erm • 0
For gamers facing technical issues or errors in complex scripts, the Redz Hub script download provides a reliable tool to optimize performa…
Answer: How can I correctly use phyloseq with Docker? by Kevin Blighe ★ 4.0k
The Bioconductor version must be compatible with the R version. Bioconductor version 3.18 is compatible with R version 4.3. The Dockerfile …
Answer: Boolean Gate Combination for Any 2 Positive Events in flowWorkspace by Kevin Blighe ★ 4.0k
Your proposed code is correct and will achieve the desired outcome. The boolean filter expression `IFNg & TNFa | IFNg & IL2 | TNFa & IL2` i…
Answer: Guidance Requested on GCN Network Analysis and Module Enrichment in R by Kevin Blighe ★ 4.0k
The discrepancy between `final_exp1` and `final_exp2` could arise from several factors, despite matching dimensions. The `identical()` func…
Votes
Answer: Highly similar RNA-seq samples in PCA - pooling or technical duplication?
Comment: Highly similar RNA-seq samples in PCA - pooling or technical duplication?
Answer: Post translational modifications and phosphoproteomics in limpa?
Answer: Post translational modifications and phosphoproteomics in limpa?
Answer: Identifying differentially expressed genes in individual samples from a large co
Awards • All
Popular Question to Gordon Smyth 53k
Popular Question to shepherl 4.2k
Supporter to fabio.marroni • 0
Popular Question to Guido Hooiveld ★ 4.1k
Popular Question to James W. MacDonald 68k
Locations • All
The city by the bay, 22 minutes ago
WEHI, Melbourne, Australia, 4 hours ago
Australia/Melbourne/Monash University Genomics and Bioinformatics Platform, 5 hours ago
Pakistan, 6 hours ago
Pakistan, 7 hours ago
Traffic: 651 users visited in the last hour
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6