Log In
Sign Up
about
faq
Ask a question
Latest
News
Jobs
Tutorials
Tags
Users
New Post
Latest
News
Jobs
Tutorials
Tags
Users
Log In
Sign Up
About
Limit
all time
today
this week
this month
this year
Unanswered
All posts
Sort
Update
Answers
Bookmarks
Creation
Replies
Rank
Views
Votes
Showing :
GUIDEseq
•
reset
0
votes
0
replies
252
views
Error in bam loading in getUniqueCleavageEvents() in GUIDEseq package
GUIDEseq
4 months ago
StayM
• 0
0
votes
6
replies
1.2k
views
Option to override removal of duplicate reads - GUIDEseq
GUIDEseq
updated 2.3 years ago by
Julie Zhu
★ 4.3k • written 2.3 years ago by
sharvari gujja
▴ 40
0
votes
1
reply
722
views
GUIDEseq - Error combining individual steps into the pipeline
GUIDEseq
updated 2.5 years ago by
Julie Zhu
★ 4.3k • written 2.5 years ago by
sharvari gujja
▴ 40
0
votes
0
replies
466
views
GUIDEseq - filtering offtarget sites present in background controls
GUIDEseq
2.5 years ago
sharvari gujja
▴ 40
0
votes
0
replies
506
views
GUIDEseq: read count for each offtarget
GUIDEseq
2.5 years ago
sharvari gujja
▴ 40
0
votes
0
replies
606
views
Question about input to binReads.sh in GUIDEseq
GUIDEseq
2.5 years ago
sharvari gujja
▴ 40
3
votes
1
reply
790
views
Major on-target peak not appearing in GUIDEseq results
GUIDEseq
updated 3.8 years ago by
Julie Zhu
★ 4.3k • written 3.8 years ago by
David Kuo
• 0
0
votes
2
replies
1.0k
views
getUniqueCleavageEvents() not working in GUIDEseq package
GUIDEseq
updated 3.8 years ago by
Julie Zhu
★ 4.3k • written 3.8 years ago by
Tiffany
• 0
0
votes
4
replies
1.2k
views
GUIDEseq Error using offTargetAnalysisOfPeakRegions
GUIDEseq
updated 5.0 years ago by
Julie Zhu
★ 4.3k • written 5.0 years ago by
tomas.rodriguez
▴ 10
1
vote
3
replies
1.0k
views
GUIDEseq BED input error
GUIDEseq
5.0 years ago
tomas.rodriguez
▴ 10
0
votes
2
replies
1.1k
views
GUIDEseq Error in GAlignmentPairs
GAlignmentPairs
GUIDEseq
updated 5.2 years ago by
Julie Zhu
★ 4.3k • written 5.3 years ago by
tomas.rodriguez
▴ 10
0
votes
1
reply
806
views
GUIDEseq outputDir error
GUIDEseq
updated 5.3 years ago by
Julie Zhu
★ 4.3k • written 5.3 years ago by
tomas.rodriguez
▴ 10
0
votes
3
replies
1.2k
views
GUIDEseq plus/minus strand inputs
GUIDEseq
updated 5.3 years ago by
Julie Zhu
★ 4.3k • written 5.3 years ago by
tomas.rodriguez
▴ 10
0
votes
1
reply
760
views
GUIDEseq bam input
GUIDEseq
bam
updated 5.3 years ago by
Julie Zhu
★ 4.3k • written 5.3 years ago by
tomas.rodriguez
▴ 10
0
votes
0
replies
1.2k
views
Analyzing CIRCLE-seq data using GUIDEseq package
GUIDEseq
CIRCLE-seq
7.1 years ago
Julie Zhu
★ 4.3k
2
votes
4
replies
1.7k
views
GUIDESeq analysis - handling biological and technical replicates
guideseq
updated 7.2 years ago by
Julie Zhu
★ 4.3k • written 7.2 years ago by
aamir.mir
• 0
2
votes
1
reply
1.3k
views
createBarcodeFasta in GUIDEseq
GUIDEseq
updated 7.2 years ago by
Julie Zhu
★ 4.3k • written 7.2 years ago by
aamir.mir
• 0
17 results • Page
1 of 1
Recent ...
Replies
Answer: DE analysis on Single cell RNA Seq time course data (using pseudotime) with 5 di
by
James W. MacDonald
67k
The two contrasts at the bottom are identical but for the sign of the logFC, so you should expect the same results (except for flipped sign…
Comment: Identical samples after deseq2 batch effect removal
by
Michael Love
42k
Oh, i didn't realize there is another method in the mix here. I would not necessarily trust this "batch correction" method, and suspect o…
Comment: Identifying potentially associated gene set to drug response using GSVA
by
Kent
• 0
Hi @robertc thanks for the reply. I should have explained to you the context first. I am testing over a hundred drugs on patient samples (s…
Answer: BiocNeighbours Utility for k-Nearest Neighbour Classification
by
James W. MacDonald
67k
You can easily answer this question yourself. ``` > library(BiocPkgTools) Loading required package: htmlwidgets > depdf <- buildPkgDe…
Answer: HilBertVis install error
by
James W. MacDonald
67k
It appears you have compiler flags set that preclude you from compiling (-Werror=format-security). If I install `HilbertVis` on my work box…
Votes
A: TopGO: How to retrieve the gene list related to a GO ID ?
A: Error in DESeqDataSet : some values in assay are not integers
A: correcting the batch effects in Limma and SVA
A: Using of limma moderated t-test with "corrected" expression matrix resulting fr
A: Using of limma moderated t-test with "corrected" expression matrix resulting fr
Awards
• All
Popular Question
to
alexandre.blais
▴ 50
Popular Question
to
Talip Zengin
▴ 10
Popular Question
to
Fred Hutch (Recruiting)
▴ 40
Scholar
to
Gordon Smyth
51k
Popular Question
to
chase.mateusiak
• 0
Locations
• All
United States,
2 minutes ago
EMBL Heidelberg,
6 minutes ago
Ireland,
19 minutes ago
United States,
19 minutes ago
Germany,
39 minutes ago
Traffic: 800 users visited in the last hour
Content
Search
Users
Tags
Badges
Help
About
FAQ
Access
RSS
API
Stats
Use of this site constitutes acceptance of our
User Agreement and Privacy Policy
.
Powered by the
version 2.3.6