Bioconductor GViz

Showing : GViz • reset

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1.8k

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Gviz coMET

17 months ago • updated 7 months ago Daniel E. Weeks ▴ 30

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1.4k

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DMR Methylation R Gviz

updated 6 months ago by Robert Ivanek ▴ 730 • written 3.1 years ago by ltzhou • 0

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1.0k

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DMRcate Gviz

updated 4 weeks ago by Tim Peters ▴ 180 • written 15 months ago by jose.ramirez1 ▴ 10

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810

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gviz Saccharomyces_cerevisiae Gviz ideogram

updated 8 months ago by Robert Ivanek ▴ 730 • written 8 months ago by Michael • 0

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632

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rtracklayer Gviz

updated 6 months ago by Hervé Pagès 16k • written 7 months ago by yujin ▴ 10

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471

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rtracklayer UCSC Gviz

6 months ago yujin ▴ 10

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383

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Gviz

6 months ago dbsgtk • 0

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224

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Gviz

updated 3 months ago by James W. MacDonald 66k • written 3 months ago by ilaria.maurizio • 0

8 results • Page 1 of 1

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Replies

Comment: conumee with Infinium MethylationEPIC v2.0 by sgomez • 0

Hi Max, Could you try this? https://support.bioconductor.org/p/9136138/#9136840

Comment: Error in render R qmd document (could not find function "process") by ATpoint ★ 4.2k

This is not related to Bioconductor, and even if it was, please understand that without code one cannot debug these questions. The most obv…

Comment: GSVA function by michelafrancesconi8 • 0

When I log trasform my matrix after the DESeq2 normalization, I have some negative value, should I add a 1 to all my matrix? Thank you Mi…

Comment: Normalisation using clinical traits in RNA seq using DESeq2 by sukeshinik5 • 0

Thank you, so much for the response. When we estimate factors of unwanted variable, which is the better options for factorisation of the va…

Comment: ChAMP not available for bioconductor 3.19 by Macsue • 0

Warning message:package ChAMP is not available for Bioconductor version 3.19 A version of this package for your version of R might be avail…

Votes

A: Analyzing data without replicates using DiffBind

DeSeq2 results converting ENSG IDs to Gene Symbols, more than one ENSG ID per Gene symbol

DESeq2 swap ensembl gene id rownames with gene symbol column

A: DeSeq2 results converting ENSG IDs to Gene Symbols, more than one ENSG ID per Ge

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Popular Question to Robert Castelo ★ 3.3k