Showing : Graph • reset
0
votes
0
replies
782
views
toDotR ignores edgeData
graph graph
17.4 years ago Altmann, Michael ▴ 30
1
vote
4
replies
4.5k
views
Rgraphviz fontsize
GO graph Rgraphviz GO graph Rgraphviz
updated 17.4 years ago by 6.7k • written 17.4 years ago by ▴ 80
0
votes
2
replies
1.7k
views
Adding a text label to the classvec colour bar in heatplot
Clustering Cancer graph GLAD Clustering Cancer graph GLAD
updated 17.5 years ago by ▴ 460 • written 17.5 years ago by ★ 6.5k
0
votes
4
replies
2.1k
views
Adding a text label to the classvec colour bar in heatplot
Clustering Cancer graph Clustering Cancer graph
updated 17.5 years ago by ▴ 460 • written 17.5 years ago by ▴ 510
0
votes
0
replies
1.1k
views
Adding a text label to the classvec colour bar in heatplot
graph graph
17.5 years ago Amy Mikhail ▴ 460
0
votes
2
replies
1.3k
views
plot overlay
graph graph
updated 17.6 years ago by ▴ 30 • written 17.6 years ago by ▴ 190
0
votes
1
reply
1.2k
views
updateGraph & deprecated edgemode slot
graph graph
updated 17.6 years ago by ▴ 570 • written 17.6 years ago by ★ 1.1k
0
votes
0
replies
1.4k
views
affycoretools vennSelect problem
Annotation GO Survival probe annotate genefilter affy graph limma gcrma annaffy RBGL
17.6 years ago Nick Henriquez ▴ 20
0
votes
2
replies
1.6k
views
affycoretools vennSelect problem
GO Survival annotate genefilter affy graph gcrma annaffy RBGL GOstats biomaRt affyio
updated 17.6 years ago by 68k • written 17.6 years ago by ▴ 30
0
votes
0
replies
920
views
parameters in graph.par in Rgraphviz
graph graph
17.7 years ago Paolo Innocenti ▴ 320
0
votes
2
replies
1.6k
views
heatmap and cluster with marray
graph graph
updated 17.7 years ago by 21k • written 17.7 years ago by ▴ 340
0
votes
7
replies
2.1k
views
Pairs plots in lumi, plots look different?
Microarray graph Microarray graph
updated 17.7 years ago by ★ 1.2k • written 17.7 years ago by ▴ 20
0
votes
1
reply
1.7k
views
Bug report: Help pages for degree (package graph) not displayed
Cancer graph SNAData Cancer graph SNAData
updated 17.8 years ago by ★ 1.6k • written 17.8 years ago by 25k
0
votes
0
replies
1.2k
views
Bug report: Help pages for degree (package graph) not displayed
graph SNAData graph SNAData
17.8 years ago Zembower, Kevin ▴ 50
0
votes
1
reply
1.0k
views
can't load Rgraphviz under BioC 2.2 devel version
graph Rgraphviz graph Rgraphviz
updated 17.8 years ago by ▴ 540 • written 17.8 years ago by ★ 1.6k
0
votes
3
replies
1.5k
views
two histograms in one graph
graph graph
updated 17.8 years ago by ▴ 430 • written 17.8 years ago by ▴ 50
0
votes
8
replies
2.1k
views
two-line labels in GO graphs
GO graph GO graph
updated 17.9 years ago by ★ 7.2k • written 17.9 years ago by ★ 3.4k
0
votes
3
replies
1.6k
views
oneChannelGUI problem
graph oneChannelGUI graph oneChannelGUI
updated 18.0 years ago by ▴ 500 • written 18.0 years ago by ▴ 320
0
votes
0
replies
1.4k
views
How to use the same node layout for a set of graph plots using graph and Rgraphviz?
Cancer graph Rgraphviz Cancer graph Rgraphviz
18.0 years ago Rand, Hugh ▴ 50
0
votes
2
replies
1.5k
views
fontsize in Rgraphviz
GO graph Rgraphviz GO graph Rgraphviz
updated 18.0 years ago by ▴ 540 • written 18.0 years ago by ▴ 830
0
votes
0
replies
685
views
questions on lumi
graph lumi graph lumi
18.1 years ago Pan Du ★ 1.2k
0
votes
0
replies
919
views
GO graph plotting with some in color
GO Clustering graph PROcess GO Clustering graph PROcess
18.2 years ago Loren Engrav ★ 1.0k
0
votes
0
replies
1.1k
views
Edge color knowing only outgoing node
GO graph GO graph
18.2 years ago Loren Engrav ★ 1.0k
0
votes
5
replies
1.5k
views
GO graph plotting with some in color
GO graph Rgraphviz GO graph Rgraphviz
18.2 years ago Loren Engrav ★ 1.0k
0
votes
0
replies
1.3k
views
Problems with k-cliq definition and calculations using RBGL package
Proteomics graph RBGL Proteomics graph RBGL
18.3 years ago Chanchal Kumar ▴ 130
0
votes
1
reply
1.7k
views
Bioconductor 2.1 is released
SNP Microarray SAGE Annotation Bayesian Regression GUI CGH hgu95av2 graph Rgraphviz SNP
18.3 years ago Hervé Pagès 16k
0
votes
2
replies
1.5k
views
slow graph methods
SystemsBiology graph SystemsBiology graph
updated 18.3 years ago by ★ 7.4k • written 18.3 years ago by 25k
0
votes
2
replies
1.7k
views
problem with probes2tableBM
Annotation GO Survival hgu133a2 annotate genefilter affy graph gcrma matchprobes GOstats
updated 18.4 years ago by ▴ 500 • written 18.4 years ago by ▴ 510
0
votes
1
reply
994
views
graph package: how to combine two graphs to create a third?
graph graph
updated 18.4 years ago by ▴ 510 • written 18.4 years ago by ★ 1.1k
0
votes
0
replies
1.3k
views
biomaRt -> XML::addNode masks graph
SystemsBiology Cancer graph biomaRt SystemsBiology Cancer graph biomaRt
18.4 years ago Seth Falcon ★ 7.4k
0
votes
7
replies
2.0k
views
slow insertions in to graphNEL object (24 hours for 16k nodes)
graph graph
updated 18.4 years ago by ★ 7.4k • written 18.4 years ago by ★ 1.1k
0
votes
4
replies
2.7k
views
disagreement between biomaRt and topGO
GO hgu133plus2 annotate geneplotter graph Rgraphviz PROcess goTools biomaRt Category GO
updated 18.4 years ago by ▴ 500 • written 18.4 years ago by ★ 1.4k
0
votes
1
reply
1.5k
views
Getting top level GO category for a list of genes
GO graph biomaRt GO graph biomaRt
updated 18.4 years ago by ▴ 500 • written 18.4 years ago by ▴ 10
0
votes
7
replies
2.4k
views
problem with GOstats, developmental version?
GO Survival hgu95av2 annotate affy affydata graph Rgraphviz limma gcrma matchprobes GO
updated 18.4 years ago by ★ 7.4k • written 18.4 years ago by ★ 2.2k
0
votes
10
replies
2.8k
views
comparing GO lists
Annotation GO Cancer graph GOstats Annotation GO Cancer graph GOstats
updated 18.5 years ago by ▴ 130 • written 18.5 years ago by ★ 5.5k
0
votes
5
replies
1.6k
views
how to store multiple relationships between nodes in graphNEL?
graph graph
updated 18.5 years ago by ★ 7.4k • written 18.5 years ago by ★ 1.1k
0
votes
2
replies
2.9k
views
Rgraphviz - how to use node positions from one graph as node positions in another?
graph graph
updated 18.5 years ago by ▴ 510 • written 18.5 years ago by ▴ 50
0
votes
1
reply
1.4k
views
Error loading tcltk for tkWidgets and widgetTools on duo Intel Mac under OS X
Cancer Ruuid tkWidgets graph GOstats Cancer Ruuid tkWidgets graph GOstats
updated 18.6 years ago by ▴ 10 • written 18.6 years ago by ★ 7.4k
0
votes
0
replies
1.1k
views
Error loading tcltk for tkWidgets and widgetTools on duo Intel Mac under OS X
Ruuid tkWidgets graph GOstats Ruuid tkWidgets graph GOstats
18.6 years ago Michael Parisi ▴ 10
0
votes
11
replies
2.5k
views
'recursive default argument' error in GOENTREZID2GO
GO Biobase genefilter graph Category GO Biobase genefilter graph Category
updated 18.6 years ago by ★ 7.4k • written 18.6 years ago by ▴ 260
0
votes
3
replies
1.2k
views
help with rendering layers in Rgraphviz
graph Rgraphviz graph Rgraphviz
updated 18.6 years ago by ★ 6.5k • written 18.6 years ago by ▴ 830
0
votes
9
replies
2.6k
views
problem with duplicateCorrelation and ExpressionSet objects
GO Survival cdf Biobase graph limma gcrma annaffy affyPLM simpleaffy biomaRt Category
updated 18.7 years ago by ★ 7.4k • written 18.7 years ago by ★ 2.2k
0
votes
0
replies
1.4k
views
Problem with customised endnode list in ontoCompare(goToolspackage)
Microarray GO graph goTools Category oligo Microarray GO graph goTools Category oligo
18.8 years ago Paquet, Agnes ▴ 500
0
votes
5
replies
1.9k
views
Package "graph": bug in function addEdge
graph graph
updated 18.8 years ago by ★ 7.4k • written 18.8 years ago by ▴ 20
0
votes
0
replies
1.5k
views
RBGL: bfs & dfs with directed graphs
GO Biobase annotate geneplotter graph Rgraphviz annaffy RBGL convert GO Biobase graph
18.8 years ago stephen edwards ▴ 10
0
votes
3
replies
2.4k
views
Can't get RCurl...
GO Survival annotate genefilter affy graph limma GOstats biomaRt Category affycoretools
updated 18.8 years ago by 68k • written 18.8 years ago by ★ 2.2k
0
votes
1
reply
1.4k
views
topTable "resort.by" broken...
GO Survival Biobase annotate genefilter affy affydata graph gcrma matchprobes annaffy
updated 18.8 years ago by 53k • written 18.9 years ago by ★ 2.2k
0
votes
1
reply
1.7k
views
question about limma2annaffy
GO Survival Biobase annotate genefilter geneplotter affy affydata graph limma annaffy
updated 18.8 years ago by 68k • written 18.8 years ago by ★ 2.2k
0
votes
0
replies
751
views
bugfix in graph::ftM2graphNEL
graph graph
19.0 years ago Wolfgang Huber ★ 13k
0
votes
4
replies
1.6k
views
ftM2graphNEL unexpected error
graph graph
updated 19.0 years ago by ★ 7.4k • written 19.0 years ago by ▴ 50
360 results • Page 5 of 8
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Wilcox/Mann-Whitney-U cannot work because it is bound to sample size even when all of group X are lower than all of group Y. At 4 vs 3 the …
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The design matrix that I described above is completely general. I imagine that it would be possible to use the same approach to generate fu…
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Cool, glad to hear I wasn't missing some functionality in DESeq2. I don't know that much about the differences between DESeq2 vs edgeR; my …
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Yes, so for one thing, note that Gordon has provided code for doing what you are asking in edgeR, which you can go ahead and use. You aske…
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