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Graph
•
reset
0
votes
0
replies
753
views
[Rgraphviz] Xfig file export bug
graph
graph
15.5 years ago
Sancar Adali
▴ 30
0
votes
0
replies
839
views
graph/graphNEL: edge properties from edge name
graph
graph
15.5 years ago
Gustavo Lacerda
▴ 40
0
votes
1
reply
818
views
ShortRead QA Feature
graph
cycle
graph
cycle
updated 15.5 years ago by
Martin Morgan
25k • written 15.5 years ago by
Dario Strbenac
★ 1.6k
0
votes
4
replies
1.3k
views
RNA degradation plot
graph
graph
updated 15.6 years ago by
Benilton Carvalho
★ 4.3k • written 15.6 years ago by
Assa Yeroslaviz
★ 1.5k
1
vote
1
reply
5.4k
views
edgeR: pseudocounts, logConc and logFC
Proteomics
graph
edgeR
Proteomics
graph
edgeR
updated 15.6 years ago by
Mark Robinson
★ 1.1k • written 15.6 years ago by
Ann Hess
▴ 340
0
votes
1
reply
1.5k
views
SPIA package
graph
SPIA
graph
SPIA
updated 15.6 years ago by
Seth Falcon
★ 7.4k • written 15.7 years ago by
Marcos Pinho
▴ 200
0
votes
3
replies
1.5k
views
graph object question
graph
graph
updated 15.7 years ago by
Seth Falcon
★ 7.4k • written 15.7 years ago by
Iain Gallagher
▴ 930
0
votes
1
reply
3.4k
views
what does mean of Densities on y axis in the graph generated by plotDensities
graph
graph
updated 15.8 years ago by
Saroj K Mohapatra
▴ 400 • written 15.8 years ago by
neeraj rana
▴ 100
0
votes
1
reply
1.9k
views
Seeking assistance on ROC
Microarray
GO
Classification
ROC
graph
ASSIGN
Microarray
GO
Classification
ROC
graph
updated 15.8 years ago by
Steve Lianoglou
★ 13k • written 15.8 years ago by
Sean Davis
21k
0
votes
0
replies
1.3k
views
Bioconductor Digest, Vol 83, Issue 23
Bayesian
ROC
graph
limma
Bayesian
ROC
graph
limma
15.8 years ago
M. Carmen Ruiz de Villa
▴ 10
0
votes
0
replies
1.8k
views
topGO results visualisation question
graph
topGO
graph
topGO
15.8 years ago
Iain Gallagher
▴ 930
0
votes
3
replies
1.9k
views
RpsiXML issues with latest Biogrid release files
GO
Organism
Arabidopsis thaliana
graph
RpsiXML
GO
Organism
Arabidopsis thaliana
graph
updated 15.9 years ago by
Jitao David Zhang
▴ 340 • written 15.9 years ago by
Sara JC Gosline
▴ 60
0
votes
1
reply
1.3k
views
KEGGgraph query
Pathways
graph
KEGGgraph
Pathways
graph
KEGGgraph
updated 16.0 years ago by
Jitao David Zhang
▴ 340 • written 16.0 years ago by
anupam sinha
▴ 270
0
votes
1
reply
1.6k
views
Help with Oligo Package: Extracting and Graphing
Transcription
Normalization
Yeast
probe
affy
graph
tilingArray
oligo
pdInfoBuilder
Starr
updated 16.0 years ago by
Tobias Straub
▴ 430 • written 16.0 years ago by
Noah Dowell
▴ 410
0
votes
2
replies
1.0k
views
Does hist (affy) function work on probe-pair values or probe-set values?
Preprocessing
probe
graph
Preprocessing
probe
graph
updated 16.1 years ago by
Jenny Drnevich
★ 2.0k • written 16.1 years ago by
Javier Pérez Florido
▴ 840
0
votes
0
replies
751
views
info
graph
Rgraphviz
graph
Rgraphviz
16.1 years ago
Sean Davis
21k
0
votes
1
reply
1.2k
views
Hypergraph representation of reactions
Network
graph
hypergraph
Network
graph
hypergraph
updated 16.1 years ago by
rgentleman
★ 5.5k • written 16.1 years ago by
Tony Chiang
▴ 570
0
votes
0
replies
659
views
info
graph
Rgraphviz
graph
Rgraphviz
16.1 years ago
vikas sharma
▴ 20
0
votes
0
replies
1.2k
views
rgraphviz: node attributes of a layout graph
graph
Rgraphviz
graph
Rgraphviz
16.1 years ago
Laurin Müller
▴ 10
0
votes
5
replies
1.9k
views
Compiling graph on solaris
graph
graph
updated 16.1 years ago by
Aric Gregson
▴ 50 • written 16.1 years ago by
Mark Cowley
▴ 400
0
votes
2
replies
2.0k
views
Rgraphviz: interactive graphs, how to map coordinates to plotted graph?
graph
Rgraphviz
graph
Rgraphviz
updated 16.2 years ago by
Florian Hahne
▴ 540 • written 16.2 years ago by
Rainer Machne
▴ 60
0
votes
1
reply
1.5k
views
Rgraphviz: interactive graphs, how to map coordinates to plotted graph?
graph
Rgraphviz
graph
Rgraphviz
updated 16.2 years ago by
Wolfgang Huber
★ 13k • written 16.2 years ago by
Rainer Machne
▴ 60
0
votes
0
replies
896
views
snapCGH plotting
GO
graph
snapCGH
GO
graph
snapCGH
16.2 years ago
Boris Umylny
▴ 120
0
votes
0
replies
1.3k
views
Rgraphviz node size + arrowhead size
graph
Rgraphviz
graph
Rgraphviz
16.3 years ago
Yaniv Semel
▴ 60
0
votes
0
replies
1.2k
views
plotProfiles (goProfiles) and bitmap
GO
graph
goProfiles
GO
graph
goProfiles
16.4 years ago
Jean-Pierre Desvignes
▴ 60
0
votes
1
reply
885
views
help ! microarray 3d smoothed surface plot
Microarray
graph
Microarray
graph
updated 16.4 years ago by
Vincent J. Carey, Jr.
6.7k • written 16.4 years ago by
Giulio Di Giovanni
▴ 540
0
votes
2
replies
1.9k
views
FlowViz graphics problems
Microarray
Visualization
graph
flowCore
flowViz
Microarray
Visualization
graph
flowCore
updated 16.4 years ago by
Nishant Gopalakrishnan
▴ 340 • written 16.4 years ago by
Anja Schiel
▴ 20
0
votes
0
replies
1.6k
views
Question about using oligo and SNPchip for copy number analysis
SNP
Cancer
graph
oligo
SNPchip
oligoClasses
VanillaICE
crlmm
SNP
Cancer
graph
oligo
16.5 years ago
Min-Han Tan
▴ 40
0
votes
1
reply
1.0k
views
Showing two datasets in the same plot
graph
graph
updated 16.5 years ago by
Laurent Gautier
★ 2.3k • written 16.5 years ago by
Peder Worning
▴ 100
0
votes
4
replies
1.5k
views
Rredland installation difficulties
Pathways
graph
Rredland
Pathways
graph
Rredland
updated 16.5 years ago by
Patrick Aboyoun
★ 1.6k • written 16.5 years ago by
Paul Shannon
★ 1.1k
0
votes
1
reply
1.0k
views
GenomeGraphs
Cancer
graph
Cancer
graph
updated 16.5 years ago by
Paul Leo
▴ 970 • written 16.5 years ago by
Max Kauer
▴ 140
0
votes
3
replies
3.1k
views
Visualizing KEGG pathways
Pathways
graph
Pathways
graph
updated 16.5 years ago by
Saroj K Mohapatra
▴ 400 • written 16.5 years ago by
Tim Smith
★ 1.1k
0
votes
0
replies
1.5k
views
Bioconductor 2.4 is released
Microarray
qPCR
Metabolomics
Annotation
Normalization
graph
flowCore
Microarray
qPCR
16.6 years ago
Patrick Aboyoun
★ 1.6k
0
votes
0
replies
1.6k
views
limma Time Course Experiments question
graph
limma
SANTA
graph
limma
SANTA
16.6 years ago
Marcelo Laia
▴ 450
0
votes
1
reply
870
views
Problems with combineNodes in graph
graph
graph
updated 16.6 years ago by
Florian Hahne
▴ 540 • written 16.6 years ago by
Michael Hahsler
▴ 10
0
votes
0
replies
1.2k
views
GenomeGraphs plot colours (bug?)
graph
GenomeGraphs
graph
GenomeGraphs
16.7 years ago
Tim Rayner
▴ 270
0
votes
5
replies
2.0k
views
biomaRt and Ensembl probe set filter....
cdf
probe
affy
graph
limma
biomaRt
cdf
probe
affy
graph
limma
biomaRt
updated 16.8 years ago by
James W. MacDonald
68k • written 16.8 years ago by
Jesper Ryge
▴ 110
0
votes
0
replies
679
views
Problem with package "GenomeGraphs"
Visualization
graph
Visualization
graph
16.8 years ago
Philippe Thomas
▴ 30
0
votes
4
replies
2.0k
views
error with ontoCompare (goTools)
GO
hgu133a
graph
goTools
GO
hgu133a
graph
goTools
updated 16.8 years ago by
Alex Sanchez
▴ 90 • written 16.8 years ago by
Wolfgang Raffelsberger
▴ 160
0
votes
0
replies
1.7k
views
qPCR NEWS - December 2008
qPCR
graph
PROcess
microRNA
qPCR
graph
PROcess
microRNA
16.9 years ago
qPCR Platform - the reference in real-t…
▴ 170
0
votes
0
replies
740
views
Question about graph package
Cancer
graph
Rgraphviz
Cancer
graph
Rgraphviz
16.9 years ago
Florian Hahne
▴ 540
0
votes
0
replies
1.6k
views
sd==0 for some probesets when using gcrma
Microarray
Proteomics
Epigenetics
Normalization
GO
Cancer
hgu95av2
affy
graph
gcrma
GO
16.9 years ago
Dick Beyer
★ 1.4k
0
votes
0
replies
999
views
Fwd: snapCGH: "Error in segments(...
Genetics
graph
Genetics
graph
17.0 years ago
Radek Blatny
▴ 30
0
votes
0
replies
1.2k
views
KEGG pathway layout/rendering
Pathways
graph
PROcess
Pathways
graph
PROcess
17.0 years ago
Sim, Fraser
▴ 350
2
votes
0
replies
1.7k
views
Problem using Rgraphviz (edge weights going missing).
GO
graph
Rgraphviz
GO
graph
Rgraphviz
17.1 years ago
Dan Bolser
▴ 40
0
votes
2
replies
1.4k
views
Simpleaffy: how are 3/5 ratios calculated
graph
simpleaffy
PROcess
graph
simpleaffy
PROcess
updated 17.1 years ago by
Yogi Sundaravadanam
▴ 320 • written 17.1 years ago by
Ganiraju Manyam
▴ 50
0
votes
0
replies
1.2k
views
Question on node attribute fontsize in Rgraphviz
graph
Rgraphviz
graph
Rgraphviz
17.1 years ago
Claudio Lottaz
▴ 40
0
votes
1
reply
838
views
labels on graph
GO
graph
GO
graph
updated 17.1 years ago by
Sean Davis
21k • written 17.1 years ago by
Tim Smith
★ 1.1k
0
votes
1
reply
802
views
Is from and to reversed in the toDotR function in the graph package?
graph
graph
updated 17.2 years ago by
Vincent J. Carey, Jr.
6.7k • written 17.2 years ago by
Altmann, Michael
▴ 30
0
votes
0
replies
1.8k
views
topGO and font size in the graph plots
graph
Rgraphviz
topGO
graph
Rgraphviz
topGO
17.2 years ago
michael watson IAH-C
★ 3.4k
360 results • Page
4 of 8
Recent ...
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Comment: featureCounts -L: high unassigned:mapq fraction
by
eja.gssssssse.r.m
• 0
If you re looking to enjoy a fun mobile experience, the 3 patti vegas game offers a seamless way to play classic card games on your phone. …
Answer: What R/Bioconductor tools would you recommend for the analysis of sncRNA, specif
by
Kevin Blighe
★ 4.0k
Hello Matthew, Thanks for the detailed description-this sounds like a classic challenge in sncRNA analysis, where piRNAs (and other tsRN…
Answer: VariantAnnotation does escape = within header string quotes
by
Kevin Blighe
★ 4.0k
Hi, Thanks for the minimal reproduction - this is very clear and confirms a bug in `VariantAnnotation::writeVcf()`. The issue is that th…
Answer: Setting up a DESeq2 Design with Paired Data
by
Kevin Blighe
★ 4.0k
Hello, Your design formula looks mostly correct to me, but I believe that `vessel_n` should be `replicate` (or whatever unique identifie…
Comment: Failure to download resources (MeSHDb) from AnnotationHub
by
Steve Lianoglou
★ 13k
That fixed it, thanks Lori!
Votes
Answer: DESeq2 design for haplotype MPRA
Answer: Failure to download resources (MeSHDb) from AnnotationHub
Answer: Failure to download resources (MeSHDb) from AnnotationHub
Answer: Suppress warning in RHDF5 write
Answer: Suppress warning in RHDF5 write
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