Showing : HIV • reset
1
vote
24
replies
6.8k
views
GenomicAlignments - extracting sequence signatures from bam file
bam file HIV cytosine
8.1 years ago • updated 8.0 years ago achaillon • 0
0
votes
0
replies
2.6k
views
Job: Bioinformatician - The Ragon Institute of MGH, MIT and Harvard
bioinformatician job bioinformatics immunology HIV Job
8.9 years ago • updated 8.6 years ago Ragon Institute of MGH, MIT and Harvard • 0
0
votes
0
replies
4.9k
views
ComBat
Transcription Genetics Pathways Network Survival Cancer Breast Colon Kidney Leukemia HIV
13.0 years ago SSc Array Core ▴ 10
0
votes
0
replies
2.0k
views
Post Doctoral Openings at University of Pittsburgh
Bayesian HIV Bayesian HIV
13.0 years ago Porterfield, Toni ▴ 10
0
votes
3
replies
1.8k
views
Correlation analysis
Microbiome HIV Microbiome HIV
updated 14.0 years ago by 21k • written 14.0 years ago by ▴ 20
0
votes
1
reply
1.5k
views
eBayes error
HIV HIV
updated 14.8 years ago by 21k • written 14.8 years ago by ▴ 570
0
votes
0
replies
1.2k
views
Rtreemix (NEW package)
Cancer HIV Rtreemix Cancer HIV Rtreemix
17.4 years ago Jasmina Bogojeska ▴ 30
0
votes
0
replies
1.5k
views
postdoc position available at FHCRC
Cancer HIV Cancer HIV
17.7 years ago Harlan Robins ▴ 10
0
votes
0
replies
2.2k
views
Postdoctoral position for 'Statistical Methods in Bioinformatics'
Genetics HIV Genetics HIV
18.9 years ago Adrian Alexa ▴ 400
0
votes
4
replies
2.1k
views
Using limma with contrast matrix ,replicate spots, donor effects
HIV limma HIV limma
updated 20.8 years ago by 53k • written 20.8 years ago by ▴ 120
0
votes
2
replies
1.5k
views
Re: NA's
HIV HIV
23.6 years ago rgentleman ★ 5.5k
11 results • Page 1 of 1
Recent ...
Replies
Answer: Using DESeq2 for age prediction by ATpoint ★ 5.0k
The package has no such inbuilt function but you are free to use the vst (or any normalized) counts to train a regression model or classifi…
Comment: Best practice for handling large data (matrix with >2^31-1 non-zero elements) in by James W. MacDonald 68k
Aaron already answered your question. If you have an HDF5 file, it will be read in as a `TENxMatrix` object, which isn't actually read in -…
Comment: Best practice for handling large data (matrix with >2^31-1 non-zero elements) in by dan.gatti • 0
Very strange. We have the same package versions. I tried adding the mtx.class, type, and delayed arguments, but it's still making the coun…
Comment: DESeq2 for candidate gene analysis by piffelpaff ▴ 20
thank you so much for answering Dr. Love!
Answer: DESeq2 for candidate gene analysis by Michael Love 43k
Your plan 1 is reasonable. Run DESeq2 on the whole dataset to obtain size factors and moderated dispersion estimates and then extract the u…
Votes
A: Multi-level experiments in Limma
Answer: Should voomWithQualityWeights still be used when the sample-specific weights var
Answer: DESeq2 for candidate gene analysis
DESeq2 for candidate gene analysis
Answer: DESeq2 for candidate gene analysis
Awards • All
Popular Question to Gordon Smyth 53k
Popular Question to Matej • 0
Popular Question to Hervé Pagès 16k
Popular Question to Josef Frank • 0
Popular Question to dan.gatti • 0
Locations • All
USA, 5 minutes ago
United States, 26 minutes ago
United States, 1 hour ago
United States, 1 hour ago
United States, 2 hours ago
Traffic: 621 users visited in the last hour
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6