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HIV
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GenomicAlignments - extracting sequence signatures from bam file
bam file
HIV
cytosine
8.1 years ago • updated 8.0 years ago
achaillon
• 0
0
votes
0
replies
2.6k
views
Job:
Bioinformatician - The Ragon Institute of MGH, MIT and Harvard
bioinformatician job
bioinformatics
immunology
HIV
Job
8.9 years ago • updated 8.6 years ago
Ragon Institute of MGH, MIT and Harvard
• 0
0
votes
0
replies
4.9k
views
ComBat
Transcription
Genetics
Pathways
Network
Survival
Cancer
Breast
Colon
Kidney
Leukemia
HIV
13.0 years ago
SSc Array Core
▴ 10
0
votes
0
replies
2.0k
views
Post Doctoral Openings at University of Pittsburgh
Bayesian
HIV
Bayesian
HIV
13.0 years ago
Porterfield, Toni
▴ 10
0
votes
3
replies
1.8k
views
Correlation analysis
Microbiome
HIV
Microbiome
HIV
updated 14.0 years ago by
Sean Davis
21k • written 14.0 years ago by
Minh Bui
▴ 20
0
votes
1
reply
1.5k
views
eBayes error
HIV
HIV
updated 14.8 years ago by
Sean Davis
21k • written 14.8 years ago by
Reema Singh
▴ 570
0
votes
0
replies
1.2k
views
Rtreemix (NEW package)
Cancer
HIV
Rtreemix
Cancer
HIV
Rtreemix
17.4 years ago
Jasmina Bogojeska
▴ 30
0
votes
0
replies
1.5k
views
postdoc position available at FHCRC
Cancer
HIV
Cancer
HIV
17.7 years ago
Harlan Robins
▴ 10
0
votes
0
replies
2.2k
views
Postdoctoral position for 'Statistical Methods in Bioinformatics'
Genetics
HIV
Genetics
HIV
18.9 years ago
Adrian Alexa
▴ 400
0
votes
4
replies
2.1k
views
Using limma with contrast matrix ,replicate spots, donor effects
HIV
limma
HIV
limma
updated 20.8 years ago by
Gordon Smyth
53k • written 20.8 years ago by
Pita
▴ 120
0
votes
2
replies
1.5k
views
Re: NA's
HIV
HIV
23.6 years ago
rgentleman
★ 5.5k
11 results • Page
1 of 1
Recent ...
Replies
Answer: Using DESeq2 for age prediction
by
ATpoint
★ 5.0k
The package has no such inbuilt function but you are free to use the vst (or any normalized) counts to train a regression model or classifi…
Comment: Best practice for handling large data (matrix with >2^31-1 non-zero elements) in
by
James W. MacDonald
68k
Aaron already answered your question. If you have an HDF5 file, it will be read in as a `TENxMatrix` object, which isn't actually read in -…
Comment: Best practice for handling large data (matrix with >2^31-1 non-zero elements) in
by
dan.gatti
• 0
Very strange. We have the same package versions. I tried adding the mtx.class, type, and delayed arguments, but it's still making the coun…
Comment: DESeq2 for candidate gene analysis
by
piffelpaff
▴ 20
thank you so much for answering Dr. Love!
Answer: DESeq2 for candidate gene analysis
by
Michael Love
43k
Your plan 1 is reasonable. Run DESeq2 on the whole dataset to obtain size factors and moderated dispersion estimates and then extract the u…
Votes
A: Multi-level experiments in Limma
Answer: Should voomWithQualityWeights still be used when the sample-specific weights var
Answer: DESeq2 for candidate gene analysis
DESeq2 for candidate gene analysis
Answer: DESeq2 for candidate gene analysis
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