Bioconductor HTSeq

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DEXSeq HTSeq R

2.5 years ago • updated 2.4 years ago yr542 • 0

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1.8k

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DESeq2 microRNA HTSeq

3.1 years ago abhay.kanodia • 0

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1.4k

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DESeq2 RNA-seq HTseq DESeqDataSetFromHTSeqCount

updated 3.2 years ago by Michael Love 43k • written 3.2 years ago by abhay.kanodia • 0

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DESeq2 htseq DEGseq RNASeq read

updated 3.3 years ago by Michael Love 43k • written 3.3 years ago by CP • 0

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1.7k

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software error HTSeq installation

updated 6.0 years ago by Martin Morgan 25k • written 6.0 years ago by eric33150 • 0

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5.4k

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voom htseq edgeR limma RNASeq123

updated 7.1 years ago by Gordon Smyth 53k • written 8.7 years ago by wd ▴ 30

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2.1k

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DEXSeq dexseq_count htseq

9.0 years ago mat.lesche ▴ 110

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2.6k

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HTSeq HTSeqCounts Could not find function DEXSeq

updated 9.8 years ago by Martin Morgan 25k • written 9.8 years ago by sakura.nussbaum ▴ 10

8 results • Page 1 of 1

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Answer: Bulk RNAseq analysis for by Gordon Smyth 53k

All three packages allow paired comparisons, where the clone is the "pair". limma moreover allows mixed models (just run `voomLmFit` with `…

Comment: Announcing a New Journal - Bioinformatics Methods and Applications - Now Open fo by a2a2haa • 0

By promoting reproducible analysis, the scientific community can better understand the precise mechanisms that make [Hydrogen inhalation sa…

Answer: Bulk RNAseq analysis for by James W. MacDonald 68k

In my experience, the within-clone variability of differentiated stem cells is often as large or larger than the between-clone variability,…

Comment: Jobs at Ensembl by frostybuddyy • 0

I found your blog "Jobs at Ensembl" quite fascinating! The way you talked about the convergence of bioinformatics and data science in emplo…

Comment: Postdoctoral Fellow (Computational Biology / Bioinformatics) - Neuroepigenetics by mudasarnaeem2020 • 0

Promoting UDISE+ Features on Social Media to Increase Awareness https://udisseplus.com/[enter link description here][1] [1]: https://ud…

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Comment: Are transformed values from rlog /vst log2 normalized counts?

Are transformed values from rlog /vst log2 normalized counts?

Answer: Bulk RNAseq analysis for

Answer: DiffBind differential analysis

Answer: Limma-voom sample weights and impact on DEG numbers

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Popular Question to Guido Hooiveld ★ 4.1k