Bioconductor HTseq

Showing : HTseq • reset

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1.2k

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DEXSeq HTSeq R

2.3 years ago • updated 2.2 years ago yr542 • 0

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1.7k

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DESeq2 microRNA HTSeq

2.9 years ago abhay.kanodia • 0

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1.3k

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DESeq2 RNA-seq HTseq DESeqDataSetFromHTSeqCount

updated 3.0 years ago by Michael Love 43k • written 3.0 years ago by abhay.kanodia • 0

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1.3k

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DESeq2 htseq DEGseq RNASeq read

updated 3.1 years ago by Michael Love 43k • written 3.1 years ago by CP • 0

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1.6k

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software error HTSeq installation

updated 5.7 years ago by Martin Morgan 25k • written 5.7 years ago by eric33150 • 0

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5.3k

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voom htseq edgeR limma RNASeq123

updated 6.9 years ago by Gordon Smyth 53k • written 8.5 years ago by wd ▴ 30

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2.0k

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DEXSeq dexseq_count htseq

8.8 years ago mat.lesche ▴ 110

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2.5k

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HTSeq HTSeqCounts Could not find function DEXSeq

updated 9.6 years ago by Martin Morgan 25k • written 9.6 years ago by sakura.nussbaum ▴ 10

8 results • Page 1 of 1

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Answer: How can I correctly use phyloseq with Docker? by Kevin Blighe ★ 4.0k

The Bioconductor version must be compatible with the R version. Bioconductor version 3.18 is compatible with R version 4.3. The Dockerfile …

Answer: Boolean Gate Combination for Any 2 Positive Events in flowWorkspace by Kevin Blighe ★ 4.0k

Your proposed code is correct and will achieve the desired outcome. The boolean filter expression `IFNg & TNFa | IFNg & IL2 | TNFa & IL2` i…

Answer: Install old version of DESeq2 by Kevin Blighe ★ 4.0k

The Dockerfile that you have provided is appropriate for installing DESeq2 and apeglm from Bioconductor release 3.10, which corresponds to …

Answer: Guidance Requested on GCN Network Analysis and Module Enrichment in R by Kevin Blighe ★ 4.0k

The discrepancy between `final_exp1` and `final_exp2` could arise from several factors, despite matching dimensions. The `identical()` func…

Answer: ORFik: spliced 5utr regions by Kevin Blighe ★ 4.0k

Hello Luna. The findUORFs function in ORFik identifies upstream open reading frames by extracting and concatenating the sequences of exo…

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Answer: Highly similar RNA-seq samples in PCA - pooling or technical duplication?

Comment: Highly similar RNA-seq samples in PCA - pooling or technical duplication?

Answer: Post translational modifications and phosphoproteomics in limpa?

Answer: Identifying differentially expressed genes in individual samples from a large co

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Scholar to Gordon Smyth 53k