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HapMap
•
reset
0
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0
replies
1.1k
views
Do you know a sofware to draw pedigrees + haplotypes?
SequencingData
STR
MutationalPatterns
pedigree
HapMap
4.4 years ago
Negar
• 0
0
votes
0
replies
1.1k
views
Access HapMap from biomart
hapmap
9.9 years ago
jaganmutyala
• 0
2
votes
3
replies
6.0k
views
Linkage disequilibrium with 1000 Genomes/HapMap
HapMap
genomes
HapMap
genomes
11.4 years ago
enricoferrero
▴ 680
0
votes
2
replies
2.7k
views
ensemblVEP, variant_effect_predictor versions and release schedule
Transcription
HapMap
PolyPhen
SIFT
convert
genomes
ensemblVEP
Transcription
HapMap
SIFT
updated 11.9 years ago by
Valerie Obenchain
★ 6.8k • written 11.9 years ago by
Thomas Sandmann
▴ 30
0
votes
0
replies
1.3k
views
Problem in reading SNP hapmap data
SNP
HapMap
SNP
HapMap
12.2 years ago
Xiaolian Yuan
▴ 30
0
votes
1
reply
1.8k
views
DiffBind & Chip-exo
HapMap
HapMap
12.4 years ago
Rory Stark
★ 5.2k
0
votes
0
replies
1.8k
views
the set of SNPs difference between Genome build 37.1 and 37.3
SNP
HapMap
SNP
HapMap
13.3 years ago
shirley zhang
★ 1.0k
0
votes
0
replies
1.2k
views
How to make Illumina cluster files from HapMap
HapMap
HapMap
13.6 years ago
JiangZhengyu
▴ 40
0
votes
1
reply
1.7k
views
Help for snpMatrix
HapMap
HapMap
updated 13.8 years ago by
Vincent J. Carey, Jr.
6.7k • written 13.8 years ago by
MLSC MANIPAL
▴ 120
0
votes
0
replies
1.2k
views
Help to access hapmap using biomart
HapMap
biomaRt
HapMap
biomaRt
13.8 years ago
MLSC MANIPAL
▴ 120
0
votes
0
replies
3.0k
views
Limma - RNA-Seq DE genes - Quantile normalized log transformed RPKM data
HapMap
limma
HapMap
limma
14.0 years ago
Gordon Smyth
53k
0
votes
1
reply
1.9k
views
biomaRt and HapMap
SNP
HapMap
biomaRt
SNP
HapMap
biomaRt
updated 14.4 years ago by
Steffen Durinck
▴ 540 • written 14.4 years ago by
Deidre
▴ 10
0
votes
0
replies
1.5k
views
Illumina CanineHD CNV & crlmm?
GO
HapMap
cdf
affy
crlmm
GO
HapMap
cdf
affy
crlmm
15.0 years ago
Matthew Ritchie
▴ 1000
0
votes
8
replies
2.5k
views
mouse SNPs
SNP
Annotation
GO
HapMap
annotate
SNP
Annotation
GO
HapMap
annotate
15.3 years ago
Glazko, Galina
▴ 350
0
votes
3
replies
1.7k
views
HapMap gene list
GO
HapMap
GO
HapMap
updated 15.4 years ago by
Kasper Daniel Hansen
★ 6.5k • written 15.4 years ago by
noxyport@gmail.com
▴ 20
0
votes
2
replies
1.6k
views
error from rsamtools on 1000 genomes
Cancer
HapMap
Rsamtools
genomes
Cancer
HapMap
Rsamtools
genomes
updated 15.4 years ago by
Martin Morgan
25k • written 15.4 years ago by
Sergii Ivakhno
▴ 100
0
votes
3
replies
1.5k
views
smlSet
SNP
HapMap
GGtools
SNP
HapMap
GGtools
updated 15.7 years ago by
Vincent J. Carey, Jr.
6.7k • written 15.7 years ago by
claire pujoll
▴ 30
0
votes
2
replies
1.6k
views
Strange output in GenABEL convert.snp.ped()
SNP
HapMap
SNP
HapMap
updated 15.8 years ago by
Martin Morgan
25k • written 15.8 years ago by
Paul Geeleher
★ 1.3k
0
votes
0
replies
947
views
Hapmap miRNA expression data
miRNA
HapMap
ArrayExpress
miRNA
HapMap
ArrayExpress
16.0 years ago
Paul Geeleher
★ 1.3k
0
votes
0
replies
1.7k
views
SNPs in High Linkage Disequilibrium
SNP
HapMap
SNP
HapMap
16.5 years ago
palermogp@libero.it
▴ 10
0
votes
3
replies
1.7k
views
Problem with justSNPRMA, library "oligo"
SNP
HapMap
SNP
HapMap
16.8 years ago
alessio boattini
▴ 30
0
votes
2
replies
1.5k
views
Problems with oligo and pd.genomewidesnp.6
SNP
Annotation
HapMap
SNP
Annotation
HapMap
updated 17.6 years ago by
Vincent J. Carey, Jr.
6.7k • written 17.6 years ago by
Jeremy Silver
▴ 10
0
votes
1
reply
1.3k
views
connect to HapMart with biomaRt
HapMap
biomaRt
HapMap
biomaRt
updated 17.6 years ago by
Steffen
▴ 500 • written 17.6 years ago by
Richard Pearson
▴ 390
0
votes
0
replies
1.2k
views
connect to HapMart with biomaRt
HapMap
biomaRt
HapMap
biomaRt
18.8 years ago
Steffen Durinck
▴ 580
24 results • Page
1 of 1
Recent ...
Replies
Comment: DECIPHER DesignProbes unable to design FISH-probes
by
Erik Wright
▴ 150
Are the sequences aligned (i.e., the same width) before running `TileSeqs()`?
Comment: BiocParallel (and DESeq2) - wrong args for environment subassignment
by
Michael Love
43k
BTW, I tested with no issue on MacOS ARM on our previous github issue.
Answer: DESeq(dds, parallel=TRUE) wrong args for environment subassignment
by
Michael Love
43k
The DESeq2 error makes sense, as we've talked about, given that the simple `bplapply` isn't working in your setup. Maybe give the traceb…
Answer: PTM analysis in LIMPA
by
Gordon Smyth
53k
For PTM analysis, the usual quantification command dpcQuant() is replaced by dpcImpute(). Otherwise the limpa pipeline is the same as for a…
Answer: problem reading bam files into nucleR
by
James W. MacDonald
68k
The first step is to update to the current versions of R/Bioconductor and try again. It's possible that you have run into a bug that's alre…
Votes
C: DESeq2 Following RSEM
Upcoming Ensembl API and data access changes - new blog post available
Comment: Highly similar RNA-seq samples in PCA - pooling or technical duplication?
Answer: Large logFC but somewhat high FDR
Comment: upstream git branches of bioc-release
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