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HapMap
•
reset
2
votes
3
replies
5.1k
views
Linkage disequilibrium with 1000 Genomes/HapMap
HapMap
genomes
HapMap
genomes
9.8 years ago
enricoferrero
▴ 660
0
votes
0
replies
2.7k
views
Limma - RNA-Seq DE genes - Quantile normalized log transformed RPKM data
HapMap
limma
HapMap
limma
12.4 years ago
Gordon Smyth
50k
0
votes
2
replies
2.2k
views
ensemblVEP, variant_effect_predictor versions and release schedule
Transcription
HapMap
PolyPhen
SIFT
convert
genomes
ensemblVEP
Transcription
HapMap
SIFT
updated 10.3 years ago by
Valerie Obenchain
★ 6.8k • written 10.3 years ago by
Thomas Sandmann
▴ 30
0
votes
8
replies
1.8k
views
mouse SNPs
SNP
Annotation
GO
HapMap
annotate
SNP
Annotation
GO
HapMap
annotate
13.7 years ago
Glazko, Galina
▴ 350
0
votes
1
reply
1.6k
views
biomaRt and HapMap
SNP
HapMap
biomaRt
SNP
HapMap
biomaRt
updated 12.8 years ago by
Steffen Durinck
▴ 540 • written 12.8 years ago by
Deidre
▴ 10
0
votes
1
reply
1.6k
views
DiffBind & Chip-exo
HapMap
HapMap
10.8 years ago
Rory Stark
★ 5.2k
0
votes
0
replies
1.5k
views
SNPs in High Linkage Disequilibrium
SNP
HapMap
SNP
HapMap
14.9 years ago
palermogp@libero.it
▴ 10
0
votes
0
replies
1.4k
views
the set of SNPs difference between Genome build 37.1 and 37.3
SNP
HapMap
SNP
HapMap
11.7 years ago
shirley zhang
★ 1.0k
0
votes
1
reply
1.4k
views
Help for snpMatrix
HapMap
HapMap
updated 12.2 years ago by
Vincent J. Carey, Jr.
6.7k • written 12.2 years ago by
MLSC MANIPAL
▴ 120
0
votes
3
replies
1.3k
views
Problem with justSNPRMA, library "oligo"
SNP
HapMap
SNP
HapMap
15.2 years ago
alessio boattini
▴ 30
0
votes
3
replies
1.2k
views
HapMap gene list
GO
HapMap
GO
HapMap
updated 13.8 years ago by
Kasper Daniel Hansen
★ 6.5k • written 13.8 years ago by
noxyport@gmail.com
▴ 20
0
votes
2
replies
1.2k
views
error from rsamtools on 1000 genomes
Cancer
HapMap
Rsamtools
genomes
Cancer
HapMap
Rsamtools
genomes
updated 13.9 years ago by
Martin Morgan
25k • written 13.9 years ago by
Sergii Ivakhno
▴ 100
0
votes
2
replies
1.2k
views
Strange output in GenABEL convert.snp.ped()
SNP
HapMap
SNP
HapMap
updated 14.2 years ago by
Martin Morgan
25k • written 14.2 years ago by
Paul Geeleher
★ 1.3k
0
votes
2
replies
1.2k
views
Problems with oligo and pd.genomewidesnp.6
SNP
Annotation
HapMap
SNP
Annotation
HapMap
updated 16.0 years ago by
Vincent J. Carey, Jr.
6.7k • written 16.0 years ago by
Jeremy Silver
▴ 10
0
votes
0
replies
1.2k
views
Illumina CanineHD CNV & crlmm?
GO
HapMap
cdf
affy
crlmm
GO
HapMap
cdf
affy
crlmm
13.4 years ago
Matthew Ritchie
▴ 1000
0
votes
3
replies
1.2k
views
smlSet
SNP
HapMap
GGtools
SNP
HapMap
GGtools
updated 14.1 years ago by
Vincent J. Carey, Jr.
6.7k • written 14.1 years ago by
claire pujoll
▴ 30
0
votes
1
reply
1.0k
views
connect to HapMart with biomaRt
HapMap
biomaRt
HapMap
biomaRt
updated 16.0 years ago by
Steffen
▴ 500 • written 16.0 years ago by
Richard Pearson
▴ 390
0
votes
0
replies
1.0k
views
Problem in reading SNP hapmap data
SNP
HapMap
SNP
HapMap
10.6 years ago
Xiaolian Yuan
▴ 30
0
votes
0
replies
974
views
connect to HapMart with biomaRt
HapMap
biomaRt
HapMap
biomaRt
17.2 years ago
Steffen Durinck
▴ 580
0
votes
0
replies
909
views
Help to access hapmap using biomart
HapMap
biomaRt
HapMap
biomaRt
12.2 years ago
MLSC MANIPAL
▴ 120
0
votes
0
replies
880
views
How to make Illumina cluster files from HapMap
HapMap
HapMap
12.0 years ago
JiangZhengyu
▴ 40
0
votes
0
replies
846
views
Access HapMap from biomart
hapmap
8.3 years ago
jaganmutyala
• 0
0
votes
0
replies
729
views
Hapmap miRNA expression data
miRNA
HapMap
ArrayExpress
miRNA
HapMap
ArrayExpress
14.4 years ago
Paul Geeleher
★ 1.3k
0
votes
0
replies
663
views
Do you know a sofware to draw pedigrees + haplotypes?
SequencingData
STR
MutationalPatterns
pedigree
HapMap
2.8 years ago
Negar
• 0
24 results • Page
1 of 1
Recent ...
Replies
Answer: Method to find pathways different between 2 groups
by
Gordon Smyth
50k
> When I search camera limma on pubmed, I found 2 papers I don't follow your point. limma's camera method has been formally cited in nea…
Comment: package goseq seems to be not available on the latest version of R
by
Gordon Smyth
50k
limma most certainly is available. It installs in R 4.4.0 and Bioc 3.19 for all platforms without any issues. It has not had any period of …
Comment: package goseq seems to be not available on the latest version of R
by
Patrycja
▴ 20
limma package also isn't available.Is there any information when these packages will be available?
Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package)
by
Michael Love
41k
Check the number of bootstrapped data per chromosome compared to the original, and then you can also look at its distribution. For this it'…
Comment: DNAString: Standard checksum function?
by
Henrik Bengtsson
★ 2.4k
For completeness: SEGUID v2 (https://www.seguid.org/), implemented in CRAN package **[seguid](https://cran.r-project.org/package=seguid)*…
Votes
Answer: Why does GSEA on edgeR results for randomized samples give highly significant p-
Handling multiple differential expression comparisons
Answer: fgsea significant result
Answer: fgsea significant result
package goseq seems to be not available on the latest version of R
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ATpoint
★ 4.1k
Popular Question
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Ben
▴ 50
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Sam
▴ 10
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Gordon Smyth
50k
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Zainab
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