Bioconductor MotifbreakR

Showing : MotifbreakR • reset

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1.4k

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motifbreakR variantannotation

updated 9.4 years ago by Simon Coetzee ▴ 50 • written 9.4 years ago by ashley.doane ▴ 20

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3.0k

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motifbreakR vcf snps motif analysis

updated 6.8 years ago by Valerie Obenchain ★ 6.8k • written 6.8 years ago by svlachavas ▴ 840

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570

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Biostrings aminoacid motifbreakR

written 7 months ago by wilson_ava • 0

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1.1k

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bioconductor motifbreakr plotmb

7.3 years ago priyankaraina10 • 0

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1.1k

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MotifbreakR R motifs

5.9 years ago camerond • 0

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1.2k

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GenomeInfoDb motifbreakR

3.9 years ago Chris Seidel ▴ 80

6 results • Page 1 of 1

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Comment: Package developing and interoperation with Bioconductor by shepherl 4.1k

Using an example with SummarizedExperiment would satisfy the requirement; however the package should take the object directly and not just…

Comment: Error in H5Dclose(h5dataset) when trying to read in kallisto h5 files by Sofia • 0

1. I have tried to update the packages and R but to no avail. I keep getting either this error or : `Error in H5Fclose(file$H5Identifier) …

Comment: Validity of SingleR with very small bulk RNAseq reference by Rohit • 0

Hi @nhaus So, what did you end up doing in such a scenario? I am facing a similar challenge

Comment: CpGs with genomic positions greater than the chromosome size in EPICv2? by Joshua Llano • 0

Thank you for your reply James. I was worried that it was my mistake.

Comment: Annotation package for Manduca sexta by GA ▴ 10

Thank you!

Votes

Answer: CpGs with genomic positions greater than the chromosome size in EPICv2?

Answer: Explannation for ROAST results

A: How DiffBind run PCA based on peak data?

Looking for equivalent EPIC chip v1 vs. v2 annotation variables

Properly constructing a hypergeometric test

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Supporter to bhanu.chandra1 • 0