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motifbreakr
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Is there a function that takes an amino acid string and returns all biologically possible substitutions?
Biostrings
aminoacid
motifbreakR
written 18 months ago by
wilson_ava
• 0
0
votes
0
replies
1.6k
views
motifBreakR error with custom BSgenome
GenomeInfoDb
motifbreakR
4.9 years ago • updated 4.8 years ago
Chris Seidel
▴ 80
0
votes
0
replies
1.5k
views
How are the MotifbreakR scores calculated, and how do they relate to one another?
MotifbreakR
R
motifs
6.8 years ago
camerond
• 0
2
votes
5
replies
3.4k
views
Error with R package motifbreakR while trying to read a vcf file with snps.from.file function
motifbreakR
vcf
snps
motif analysis
updated 7.7 years ago by
Valerie Obenchain
★ 6.8k • written 7.7 years ago by
svlachavas
▴ 840
0
votes
0
replies
1.3k
views
Motif Breaker error
bioconductor
motifbreakr
plotmb
8.2 years ago
priyankaraina10
• 0
0
votes
2
replies
1.7k
views
motifbreakR VariantAnnotation namespace error on reading vcf file
motifbreakR
variantannotation
updated 10.3 years ago by
Simon Coetzee
▴ 50 • written 10.3 years ago by
ashley.doane
▴ 20
6 results • Page
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Comment: Unable to find ENTREZ IDs
by
Adithi
• 0
Hi James, Thank you so much for your reply. My main goal is to find ortholog genes from chinese hamster gene symbols to mouse gene symbols…
Comment: Unable to find ENTREZ IDs
by
Adithi
• 0
Hi James, Thank you so much for your reply. My main goal is to find ortholog genes from chinese hamster gene symbols to mouse gene symbols…
Answer: Unable to find ENTREZ IDs
by
James W. MacDonald
68k
Those are the 'symbols', and are a concatenation of LOC and the NCBI Gene ID (what used to be called an Entrez Gene ID). As an example:http…
Answer: Inconsistencies between accessor functions for TxDb databases with selected seql
by
a2a2hd42aa
• 0
Technical inconsistencies in database accessors can disrupt your workflow, but finding a reliable source to download online mobile games sh…
Comment: Can sample-level weights be used when analysing GSVA scores in limma?
by
A.Barden
▴ 20
Thanks both for this useful information.
Votes
Answer: OrgDb for maize
Comment: Highly similar RNA-seq samples in PCA - pooling or technical duplication?
Answer: Highly similar RNA-seq samples in PCA - pooling or technical duplication?
Answer: Highly similar RNA-seq samples in PCA - pooling or technical duplication?
Do I map probes to gene symbols BEFORE or AFTER differentially expressed gene analysis?
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