Bioconductor Motif analysis

Showing : motif analysis • reset

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pwm motifs jaspar meme motif analysis

5.0 years ago rbronste ▴ 60

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motifbreakR vcf snps motif analysis

updated 5.5 years ago by Valerie Obenchain ★ 6.8k • written 5.5 years ago by svlachavas ▴ 820

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HOMER Motif Analysis

updated 5.9 years ago by Ou, Jianhong ★ 1.3k • written 5.9 years ago by JMallory • 0

3 results • Page 1 of 1

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Comment: NCBI protein conversion to CDNA and NCBI gene (in R) by Gordon Smyth 48k

Continuation of https://support.bioconductor.org/p/9155428/

Comment: Why is DMRcate not available for Bioconductor version 3.18? by Tim Peters ▴ 150

Thanks Daniel, Gordon and Lori for flagging this. DSS is only needed for the vignette so I'll remove that section, plus the dependency, som…

Comment: NCBI protein to NCBI cDNA (Ensembl conversions would be great as well) in R by R_Page • 0

Thank you, this works well. As for CDNA, I figured out what I need to find, and have made a new post regarding it.

Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package) by Poonam • 0

Hello Michael, I am continuing here and need your expert answer on this again I have performed small rna loci and DNA methylation mappin…

Comment: GOslim missing GO term by amanda • 0

Thank you for the advice and many thanks! It is WGCNA analysis. I will try your method today and see if there are some consistencies.

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Answer: Differential gene expression analysis

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