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Multifactorial
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deseq2 nested multifactorial analysis
DESeq2
multifactorial
nested
updated 23 months ago by
Basti
▴ 780 • written 23 months ago by
jd
• 0
0
votes
1
reply
975
views
Log2FC in LRT vs Wald in multifactorial design
DESeq2
LRT
multifactorial
up/down-reg
log2FC
updated 2.2 years ago by
James W. MacDonald
68k • written 2.2 years ago by
Laia
▴ 10
0
votes
1
reply
858
views
Interpreting results from DESeq2 time-series multifactorial data analysis
DESeq2
time-series
timecoursedata
timecourse
multifactorial
updated 2.2 years ago by
Michael Love
43k • written 2.3 years ago by
arshad1292
• 0
0
votes
2
replies
1.3k
views
DESeq2 interaction terms in 2x2x2 factorial design
Interactions
design
Multifactorial
DESeq2
updated 3.3 years ago by
swbarnes2
★ 1.4k • written 3.3 years ago by
Marie
• 0
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Comment: For some reason I can't update BiocManager to 3.20
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azm.ana2
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Sorry i apologize for the delay. Thank you very much for the answer. I have two supervisers and the one who knows about the computer is com…
Comment: For some reason I can't update BiocManager to 3.20
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azm.ana2
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Sorry i apologize for the delay. Thank you very much for the answer. I have two supervisers and the one who knows about the computer is com…
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Answer: SingleR with multiple single cell references
by
Aaron Lun
★ 28k
> Is it necessary to piece together the individual steps manually (e.g. aggregateReference, trainSingleR, classifySingleR, combineRecompute…
Answer: Automatically install dependencies
by
ATpoint
★ 4.7k
The BiocManager, which is sort of an extended wrapper around `install.packages`, installs all R dependencies. If you see errors then this i…
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Comment: how should I apply "cpg.annotate" to TCGA methylation data in hg38 for HM450K?
Comment: how should I apply "cpg.annotate" to TCGA methylation data in hg38 for HM450K?
Comment: how should I apply "cpg.annotate" to TCGA methylation data in hg38 for HM450K?
Comment: how should I apply "cpg.annotate" to TCGA methylation data in hg38 for HM450K?
A: Volcanoplot with limma - RAW P-values or Adj.P-Values
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