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Probe annotations for ABI Human Genome Survey V2 microarray using Oracle
annotation
probe
microarray
abi human genome survey v2
Oracle
6.1 years ago
judemtaylor
• 0
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Answer: Timecourse RNASeq analysis
by
Michael Love
41k
There are many choices for time course, and we have an example in our workflow (rnaseqGene). Otherwise, I recommend to consult a local …
Answer: Padj "NA" with thousands of low count although the raw read counts are quite lar
by
Michael Love
41k
You can either turn off independent filtering in `results` or use `ihw` see the vignette.
Comment: Why p value inconsistent when using different number of pathway score?
by
Chris
• 0
Thanks Gordon for a detail guide! Seem you track time of everything.
Answer: Version 3.15 S4Vectors packages are missing
by
shepherl
3.8k
It is missing because that package did not have any updates in the release except for the initial version. The archive directory holds prev…
Answer: putting my own expression data in deseq2
by
ATpoint
★ 4.1k
> directly from GEOquery I can tell you that GEOquery retrieves array data not appropriate for DESeq2. For anything else make your questi…
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Comment: Why p value inconsistent when using different number of pathway score?
Nominations for Bioconductor Awards 2024!
Answer: Improving the design matrices vignette in RNAseq123
Answer: Perform gene set enrichment analysis using fgsea on two conditions that don't ha
Answer: Perform gene set enrichment analysis using fgsea on two conditions that don't ha
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