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QuasR Error
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(QuasR Error) Error in checkForRemoteErrors(val) : one node produced an error: bowtie failed to perform the alignments
QuasR Error
8.3 years ago
tarek.mohamed
▴ 10
2
votes
4
replies
2.3k
views
Question: qCount in QuasR for RNAseq quantification
quasr error
updated 8.3 years ago by
Hotz, Hans-Rudolf
▴ 400 • written 8.3 years ago by
tarek.mohamed
▴ 10
1
vote
0
replies
1.6k
views
QuasR - preprocessReads fails with a SRFilterResult error
quasr
quasr error
7.2 years ago
jlncrnt
▴ 10
0
votes
5
replies
1.5k
views
package install error package is not available
quasr error
updated 8.3 years ago by
Martin Morgan
25k • written 8.3 years ago by
maedakus
▴ 10
1
vote
2
replies
1.4k
views
QuasR error usign preprocessReads
quasr error
8.3 years ago • updated 8.2 years ago
Paul Ríos
• 0
1
vote
2
replies
1.3k
views
Error in checkForRemoteErrors(val) : QuasR: can't pass alignment parameters
quasR
quasr error
alignmentparameters
quasr
5.4 years ago
Amer Ghalawinji
• 0
0
votes
1
reply
1.3k
views
Error: The specified genome ./data/BSgenome.Hsapiens.UCSC.hg19 does not have the extension of a fasta file (fa,fasta,fna)
quasr error
updated 8.2 years ago by
Hotz, Hans-Rudolf
▴ 400 • written 8.2 years ago by
ezgi_can00
• 0
0
votes
0
replies
938
views
RNA Seq // QuasR : Error while extracting unmapped reads
quasr
quasr error
paired-end reads
rnaseq
7.3 years ago
guillaume.dachy
• 0
0
votes
2
replies
737
views
QuasR qQCReport error
QuasR qQCReport
QuasR error
Error in .normarg_totalsize(totalsize)
4.3 years ago
A.Singh
• 0
9 results • Page
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Comment: DEseq2 coefficient
by
JKim
• 0
Hi Dr. Love, I'm sorry to ask another question to my old post. If the design isn't balanced, the interpretation of coefficients will be…
Comment: Store output of matchPWM()
by
mat149
▴ 70
out <- do.call(c, lapply(hitlist, function(x) as(x, "IRanges"))) Error in do.call(c, lapply(hitlist, function(x) as(x, "IRanges"))) : '…
Answer: Store output of matchPWM()
by
James W. MacDonald
65k
Something like this? ``` ind <- as.logical(sapply(hitlist, length)) out <- do.call(c, lapply(hitlist, function(x) as(x, "IRanges"))) …
Answer: log2FoldChange value is way too different when compared with counts(dds)
by
Michael Love
41k
This has been asked before, but with a multi factor design, the LFC for coefficient X adjust for the others, in a way that is often hard to…
Answer: Get genomic coordinates of CpGs sites (chromosomes, genomic position)
by
James W. MacDonald
65k
You don't say what array that is, so I will guess. ``` > library(IlluminaHumanMethylationEPICanno.ilm10b4.hg19) > Locations DataFrame…
Votes
SPIA plotP giving error
Answer: Fold change calculation in Diffbind vs. DESEQ2?
C: How to establish a subset from TxDb.Hsapiens.UCSC.hg38.knownGene DB
C: Extremely big genes in annotation TxDb packages
Make custom Txdb class objects from Txdb
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