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quasr error
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QuasR qQCReport error
QuasR qQCReport
QuasR error
Error in .normarg_totalsize(totalsize)
4.2 years ago
A.Singh
• 0
1
vote
2
replies
1.3k
views
Error in checkForRemoteErrors(val) : QuasR: can't pass alignment parameters
quasR
quasr error
alignmentparameters
quasr
5.3 years ago
Amer Ghalawinji
• 0
1
vote
0
replies
1.5k
views
QuasR - preprocessReads fails with a SRFilterResult error
quasr
quasr error
7.1 years ago
jlncrnt
▴ 10
0
votes
0
replies
903
views
RNA Seq // QuasR : Error while extracting unmapped reads
quasr
quasr error
paired-end reads
rnaseq
7.2 years ago
guillaume.dachy
• 0
0
votes
1
reply
1.3k
views
Error: The specified genome ./data/BSgenome.Hsapiens.UCSC.hg19 does not have the extension of a fasta file (fa,fasta,fna)
quasr error
updated 8.1 years ago by
Hotz, Hans-Rudolf
▴ 400 • written 8.1 years ago by
ezgi_can00
• 0
1
vote
2
replies
1.4k
views
QuasR error usign preprocessReads
quasr error
8.1 years ago
Paul Ríos
• 0
0
votes
5
replies
1.4k
views
package install error package is not available
quasr error
updated 8.1 years ago by
Martin Morgan
25k • written 8.1 years ago by
maedakus
▴ 10
2
votes
4
replies
2.2k
views
Question: qCount in QuasR for RNAseq quantification
quasr error
updated 8.2 years ago by
Hotz, Hans-Rudolf
▴ 400 • written 8.2 years ago by
tarek.mohamed
▴ 10
0
votes
5
replies
3.4k
views
(QuasR Error) Error in checkForRemoteErrors(val) : one node produced an error: bowtie failed to perform the alignments
QuasR Error
8.2 years ago
tarek.mohamed
▴ 10
9 results • Page
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Answer: maftools: Error in validateMaf(maf = maf, isTCGA = isTCGA, rdup = removeDuplicat
by
snijesh
▴ 20
You can try: using `read.delim` or `fread`. ``` my_maf = data.table::fread("path/to/maf/sample.maf") my_maf = read.maf(maf = my_maf) …
Comment: DEG Filtering
by
Amit
• 0
Hi Gordon, Thank you for your response and advice. I want to analyze Dataset GSE18090 (https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi) whic…
Comment: edgeR, 3 x 2 design with a batch effect and contrasts
by
Gordon Smyth
50k
Yes, that is a quote from [A guide to creating design matrices for gene expression experiments](https://bioconductor.org/packages/release/w…
Comment: edgeR, 3 x 2 design with a batch effect and contrasts
by
JKim
• 0
Thank you. I think I found why the order matters. > Although an intercept-free design matrix has been coded using the 0+ notation, the in…
Comment: Unable to annotate ExpressionSet object from hugene11st chip
by
Efra
• 0
I did as you told, and after running ```eset.annot <- annotateEset(eset, hugene11sttranscriptcluster.db)``` I got the next output: ``` 'se…
Votes
C: How to check that the reads in two fastq files are in the same order
Answer: edgeR, 3 x 2 design with a batch effect and contrasts
Answer: Need help with creating and plotting temporal clustering analysis of DEGs
Answer: Problem converting msigdb Human symbols to Zebrafish in gmt format
Answer: Problem converting msigdb Human symbols to Zebrafish in gmt format
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